RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ZBTB24O43167 697 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ANGPTL1O95841 491 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 TGFB3P10600 412 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 WARSP23381 471 aaKnown RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 SLC16A1P53985 500 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 OXCT1P55809 520 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 TCEAL1Q15170 157 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 SPRED3Q2MJR0 410 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 PPM1LQ5SGD2 360 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 C11orf74Q86VG3 221 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 NXNL1Q96CM4 212 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 MAGEE1Q9HCI5 957 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 IFT80Q9P2H3 777 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ZNF112Q9UJU3 913 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 SAMHD1Q9Y3Z3 626 aaKnown RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 TK2O00142 265 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 GSTM1P09488 218 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 MPP1Q00013 466 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 BNIP3Q12983 259 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 ZNF177Q13360 481 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ANGPT1Q15389 498 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 TRIM8Q9BZR9 551 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 RCOR3Q9P2K3 495 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ZMYM5Q9UJ78 669 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 TYROBPO43914 113 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 NPHS1O60500 1241 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 TMEM63AO94886 807 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 PABPC1P11940 636 aaKnown RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 PLET1Q6UQ28 207 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 GPRIN3Q6ZVF9 776 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 UTS2BQ765I0 119 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 SLC44A2Q8IWA5 706 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 ZNF420Q8TAQ5 688 aaPredicted RBP15.88■□□□□ 0.13
SMC4-204ENST00000462787 PLEKHO2Q8TD55 490 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 PIK3R3Q92569 461 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 OPTCQ9UBM4 332 aa15.88■□□□□ 0.13
SMC4-204ENST00000462787 SF3B1O75533 1304 aaKnown RBP eCLIP15.88■□□□□ 0.131e-7■■■■■ 165.2
SMC4-204ENST00000462787 SLC22A1O15245 554 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 LRIG2O94898 1065 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 XRCC1P18887 633 aaPredicted RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 ATP6V0D1P61421 351 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CTBP1Q13363 440 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 TIGD2Q4W5G0 525 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 BICRALQ6AI39 1079 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CDC73Q6P1J9 531 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 XYLT1Q86Y38 959 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 MARVELD2Q8N4S9 558 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 MRPL48Q96GC5 212 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 DLDP09622 509 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 LINC00032P0C843 101 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 FMO4P31512 558 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 SLC11A2P49281 568 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 LIPEQ05469 1076 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 HS6ST3Q8IZP7 471 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 SVOPLQ8N434 492 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CNOT6Q9ULM6 557 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 KRT87PA6NCN2 255 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 M0R2N6 131 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 FGF10O15520 208 aaPredicted RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 C4BPAP04003 597 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 ZNF7P17097 686 aaPredicted RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 TSPAN8P19075 237 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 TUBP50607 506 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 MPP2Q14168 576 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 ANKRD23Q86SG2 305 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CENPSQ8N2Z9 138 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 SPATA6LQ8N4H0 392 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 RTL3Q8N8U3 475 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 FAM156AQ8NDB6 213 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 C12orf43Q96C57 262 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 KAT8Q9H7Z6 458 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 ADGRE2Q9UHX3 823 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 PSME2Q9UL46 239 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 SSR3Q9UNL2 185 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 COQ4Q9Y3A0 265 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 FAM189A1O60320 539 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CSH1P0DML2 217 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CSH2P0DML3 217 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 GSTM5P46439 218 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 CACTIN-AS1Q8N1I8 211 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 PARP8Q8N3A8 854 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 EDEM1Q92611 657 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 KATNAL1Q9BW62 490 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 TDRD1Q9BXT4 1180 aaKnown RBP15.87■□□□□ 0.13
SMC4-204ENST00000462787 ALG2Q9H553 416 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 PHF24Q9UPV7 400 aa15.87■□□□□ 0.13
SMC4-204ENST00000462787 ZNF99A8MXY4 864 aaPredicted RBP15.86■□□□□ 0.13
SMC4-204ENST00000462787 TFECO14948 347 aaPredicted RBP15.86■□□□□ 0.13
SMC4-204ENST00000462787 PPP1R11O60927 126 aaPredicted RBP15.86■□□□□ 0.13
SMC4-204ENST00000462787 CARTPTQ16568 116 aa15.86■□□□□ 0.13
SMC4-204ENST00000462787 RBM48Q5RL73 367 aaKnown RBP15.86■□□□□ 0.13
SMC4-204ENST00000462787 IL23RQ5VWK5 629 aa15.86■□□□□ 0.13
SMC4-204ENST00000462787 SLC26A9Q7LBE3 791 aa15.86■□□□□ 0.13
SMC4-204ENST00000462787 TKTL2Q9H0I9 626 aa15.86■□□□□ 0.13
SMC4-204ENST00000462787 SUCOQ9UBS9 1254 aaKnown RBP15.86■□□□□ 0.13
SMC4-204ENST00000462787 VWA7Q9Y334 891 aa15.86■□□□□ 0.13
SMC4-204ENST00000462787 IFRD1O00458 451 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms