RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 RSPH1Q8WYR4 309 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 CASP10Q92851 521 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 OR52B2Q96RD2 323 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 TM6SF2Q9BZW4 377 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 OLA1Q9NTK5 396 aaKnown RBP11.71□□□□□ -0.54
NPHP4-204ENST00000460696 WWOXQ9NZC7 414 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 SLC2A6Q9UGQ3 507 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 TCAF1Q9Y4C2 921 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 AK5Q9Y6K8 562 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 TAF1LQ8IZX4 1826 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 ARFGEF1Q9Y6D6 1849 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 C9JVG2 144 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 IRAK2O43187 625 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 RTN3O95197 1032 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CSF2RAP15509 400 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ABL2P42684 1182 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 TMED1Q13445 227 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PAFAH1B3Q15102 231 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 NR6A1Q15406 480 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PTPRNQ16849 979 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 MARCH8Q5T0T0 291 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CNSTQ6PJW8 725 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 KCTD13Q8WZ19 329 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 VPS50Q96JG6 964 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 FCRL3Q96P31 734 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SEPHS2Q99611 448 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PRPF18Q99633 342 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CLPBQ9H078 707 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 S100A14Q9HCY8 104 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CAPN8A6NHC0 703 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 INPP4BO15327 924 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CCR10P46092 362 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CLEC6AQ6EIG7 209 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 DSELQ8IZU8 1212 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ZNF786Q8N393 782 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 FBXW8Q8N3Y1 598 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SMG8Q8ND04 991 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HEXDCQ8WVB3 486 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 UCMAQ8WVF2 138 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HMCESQ96FZ2 354 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 MIPEPQ99797 713 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SLC25A23Q9BV35 468 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 NDUFAF1Q9Y375 327 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SYCE1LA8MT33 242 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 AHSGP02765 367 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HIST1H2AGP0C0S8 130 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 T-ENOLP0DO92 83 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HIST1H2ADP20671 130 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PSMA4P25789 261 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 SLC1A2P43004 574 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PURAQ00577 322 aaKnown RBP11.7□□□□□ -0.54
NPHP4-204ENST00000460696 PCLAFQ15004 111 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 CUZD1Q86UP6 607 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HIST1H2AHQ96KK5 128 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 ACOX2Q99424 681 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 HIST1H2AJQ99878 128 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 H2AFJQ9BTM1 129 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
NPHP4-204ENST00000460696 OR51F1A6NGY5 319 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 PTGESO14684 152 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 HLA-DQB2P05538 268 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 MSLNQ13421 630 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 HECTD2Q5U5R9 776 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 DHFR2Q86XF0 187 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 FNDC5Q8NAU1 212 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 RDH11Q8TC12 318 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 IRGQQ8WZA9 623 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 UROC1Q96N76 676 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 TMEM209Q96SK2 561 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 ADNPQ9H2P0 1102 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 MOCS1Q9NZB8 636 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 SNRPB2P08579 225 aaKnown RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 BLMHQ13867 455 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 MBLAC2Q68D91 279 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 ZYG11AQ6WRX3 759 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 DNAJC14Q6Y2X3 702 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 ST13P5Q8NFI4 369 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 METTL6Q8TCB7 284 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
NPHP4-204ENST00000460696 C17orf80Q9BSJ5 609 aa11.69□□□□□ -0.54
NPHP4-204ENST00000460696 CASS4Q9NQ75 786 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms