RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SCML4Q8N228 414 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RXFP1Q9HBX9 757 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 IL23AQ9NPF7 189 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CCL26Q9Y258 94 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 SLC30A1Q9Y6M5 507 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 FCHO1O14526 889 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 GYG2O15488 501 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 INSIG1O15503 277 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 TBC1D4O60343 1298 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 ZMPSTE24O75844 475 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 GOT2P00505 430 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 HSPA1AP0DMV8 641 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 HSPA1BP0DMV9 641 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 EPCAMP16422 314 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 XPAP23025 273 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CALRP27797 417 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 HADHAP40939 763 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CDH13P55290 713 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RING1Q06587 406 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 DENND5AQ6IQ26 1287 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 MRNIPQ6NTE8 343 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RETSATQ6NUM9 610 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CEP97Q8IW35 865 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 SORCS1Q8WY21 1168 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 MARK4Q96L34 752 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 LINC00597Q9H2U6 94 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 TLE6Q9H808 572 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 VPS45Q9NRW7 570 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CLEC4EQ9ULY5 219 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 SMAD6O43541 496 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 PIGNO95427 931 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CHRNGP07510 517 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RAB10P61026 200 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 ASPHQ12797 758 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 RASA2Q15283 850 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 C6orf89Q6UWU4 347 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CCDC149Q6ZUS6 474 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 HJURPQ8NCD3 748 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CALML6Q8TD86 181 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 ESAMQ96AP7 390 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 KIFC1Q9BW19 673 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 NUF2Q9BZD4 464 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 C20orf27Q9GZN8 174 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 NMUR2Q9GZQ4 415 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 ZDHHC6Q9H6R6 413 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 COPG2Q9UBF2 871 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CD3EAPO15446 510 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 TRIM13O60858 407 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 ABLIM3O94929 683 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 GABRB3P28472 473 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 CDKN1CP49918 316 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 SLC12A1Q13621 1099 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PTPRNQ16849 979 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 HABP4Q5JVS0 413 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FSTL5Q8N475 847 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 CCDC124Q96CT7 223 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FAM167BQ9BTA0 163 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 WDR55Q9H6Y2 383 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 TXLNGQ9NUQ3 528 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 VPS51Q9UID3 782 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FKBPLQ9UIM3 349 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PACSIN3Q9UKS6 424 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 C1orf232A0A0U1RR37 186 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 A8MUI8 341 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 CFLARO15519 480 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 TRIM16O95361 564 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 NDST3O95803 873 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 HTR7P34969 479 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 ETV4P43268 484 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 ATXN3P54252 364 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.94e-6■■□□□ 14.5
NUDCD3-203ENST00000460110 IHHQ14623 411 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FAM83EQ2M2I3 478 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 STEAP4Q687X5 459 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FAM151BQ6UXP7 276 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 GBP7Q8N8V2 638 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 DCBLD1Q8N8Z6 715 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 ZFYVE19Q96K21 471 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 FEM1AQ9BSK4 669 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 SLC46A2Q9BY10 475 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 WWP1Q9H0M0 922 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 MTG2Q9H4K7 406 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.4□□□□□ -0.93e-7■■■■□ 25
NUDCD3-203ENST00000460110 THAP1Q9NVV9 213 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms