RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 ANKRD22Q5VYY1 191 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 ALG1LQ6GMV1 187 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
C4A-244ENST00000460060 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 CYB5D2Q8WUJ1 264 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 RLN3Q8WXF3 142 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 PRCCQ92733 491 aaPredicted RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 ISG20Q96AZ6 181 aaKnown RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 NUDCD1Q96RS6 583 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 MLPHQ9BV36 600 aaPredicted RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 EIF2B3Q9NR50 452 aaKnown RBP12.88□□□□□ -0.35
C4A-244ENST00000460060 SLCO3A1Q9UIG8 710 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 PLA2G4CQ9UP65 541 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 SHOC2Q9UQ13 582 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 PKD1L2Q7Z442 2459 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 PLXND1Q9Y4D7 1925 aa12.88□□□□□ -0.35
C4A-244ENST00000460060 TCRBV7S3A2A0A539 114 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TTC24A2A3L6 582 aaPredicted RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 INSIG1O15503 277 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 ATP9BO43861 1147 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 ZNF821O75541 412 aaPredicted RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 ALDH1A2O94788 518 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TMEM63AO94886 807 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 AP2A1O95782 977 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 IGSF6O95976 241 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 MMP2P08253 660 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 ECHS1P30084 290 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 CD86P42081 329 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TNFRSF4P43489 277 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 RGRP47804 291 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 CSNK1DP48730 415 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 GEMP55040 296 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 DSC2Q02487 901 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 MPP3Q13368 585 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 BRD3Q15059 726 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 E2F5Q15329 346 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 HSF5Q4G112 596 aaPredicted RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 RALGPS1Q5JS13 557 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 LPCAT2Q7L5N7 544 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SRLQ86TD4 932 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SYT12Q8IV01 421 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 FRMD1Q8N878 549 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 KDM1BQ8NB78 822 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 MCUQ8NE86 351 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SPATA22Q8NHS9 363 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TADA1Q96BN2 335 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
C4A-244ENST00000460060 NUSAP1Q9BXS6 441 aaKnown RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 FRMD8Q9BZ67 464 aaPredicted RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 UBP1Q9NZI7 540 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
C4A-244ENST00000460060 FAM153AQ9UHL3 310 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 STARD13Q9Y3M8 1113 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 NEUROG3Q9Y4Z2 214 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 ADAMTS9Q9P2N4 1935 aa12.87□□□□□ -0.35
C4A-244ENST00000460060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 MAP3K13O43283 966 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 PMPCBO75439 489 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SUN1O94901 812 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 GSRP00390 522 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SERPINF2P08697 491 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 PTGER3P43115 390 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 MAPK8P45983 427 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SCNN1BP51168 640 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 AP1S1P61966 158 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SNRPD1P62314 119 aaKnown RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 SKOR1P84550 965 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SYCP2LQ5T4T6 812 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
C4A-244ENST00000460060 EMC10Q5UCC4 262 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 KCTD11Q693B1 232 aa12.86□□□□□ -0.35
C4A-244ENST00000460060 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms