RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 RABIFP47224 123 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 POLR2LP62875 67 aaKnown RBP14.36□□□□□ -0.11
THBS3-204ENST00000460050 BNIP3Q12983 259 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 SLC9A4Q6AI14 798 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 MFSD7Q6UXD7 560 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 KDM7AQ6ZMT4 941 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 GLRX5Q86SX6 157 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 LRRN4Q8WUT4 740 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 MAML1Q92585 1016 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 FATE1Q969F0 183 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 HDAC11Q96DB2 347 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 ZNF830Q96NB3 372 aaPredicted RBP14.36□□□□□ -0.11
THBS3-204ENST00000460050 CDC6Q99741 560 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 REXO2Q9Y3B8 237 aaKnown RBP14.36□□□□□ -0.11
THBS3-204ENST00000460050 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 ALG6Q9Y672 507 aa14.36□□□□□ -0.11
THBS3-204ENST00000460050 AKAP13Q12802 2813 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 HTRA2O43464 458 aaPredicted RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 SDC3O75056 442 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 LIG3P49916 1009 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 PFN3P60673 137 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 ITKQ08881 620 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 TRAF2Q12933 501 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 RALGDSQ12967 914 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 RALGPS1Q5JS13 557 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 C11orf63Q6NUN7 778 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 KANSL1Q7Z3B3 1105 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 RFX6Q8HWS3 928 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 DCP2Q8IU60 420 aaKnown RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 TP53I13Q8NBR0 393 aaPredicted RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 CCNYQ8ND76 341 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 TPCN2Q8NHX9 752 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 PDCD6IPQ8WUM4 868 aaKnown RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 BAG1Q99933 345 aaPredicted RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 MAK16Q9BXY0 300 aaKnown RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
THBS3-204ENST00000460050 IMPACTQ9P2X3 320 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 SALL4Q9UJQ4 1053 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 ANGPTL2Q9UKU9 493 aa14.35□□□□□ -0.11
THBS3-204ENST00000460050 GOLGA4Q13439 2230 aaKnown RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 COL5A1P20908 1838 aaPredicted RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 LZTS3O60299 673 aaPredicted RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 NEBLO76041 1014 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 CPP00450 1065 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 FTH1P19P0C7X4 201 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 CCNB1P14635 433 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 ZFXP17010 805 aaPredicted RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 DYNLT1P63172 113 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 SHC2P98077 582 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 FZD2Q14332 565 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 IRF4Q15306 451 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 TPRG1LQ5T0D9 272 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 NPNTQ6UXI9 565 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 CCDC13Q8IYE1 715 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.34□□□□□ -0.11
THBS3-204ENST00000460050 IFT43Q96FT9 208 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 LGMNQ99538 433 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 CAAP1Q9H8G2 361 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 MBNL1Q9NR56 388 aaKnown RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
THBS3-204ENST00000460050 FTSJ1Q9UET6 329 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 WASF3Q9UPY6 502 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 APOBEC2Q9Y235 224 aaKnown RBP14.34□□□□□ -0.11
THBS3-204ENST00000460050 TTLL3Q9Y4R7 772 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 DUSP10Q9Y6W6 482 aa14.34□□□□□ -0.11
THBS3-204ENST00000460050 SPTY2D1-AS1A0A0U1RR47 76 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 CFAP69A5D8W1 941 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 KCNK1O00180 336 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 PGLSO95336 258 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 TRIM16O95361 564 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.12
THBS3-204ENST00000460050 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 ATXN1LP0C7T5 689 aaKnown RBP14.33□□□□□ -0.12
THBS3-204ENST00000460050 ELFN1P0C7U0 828 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 SPINK2P20155 84 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 CDKN2BP42772 138 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 VAV2P52735 878 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 DSC2Q02487 901 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
THBS3-204ENST00000460050 PDE1CQ14123 709 aaPredicted RBP14.33□□□□□ -0.12
THBS3-204ENST00000460050 LRRC14Q15048 493 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 PDK1Q15118 436 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 TAZQ16635 292 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 WSCD2Q2TBF2 565 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
THBS3-204ENST00000460050 ARMC12Q5T9G4 340 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms