RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-206ENST00000459895 CCR5P51681 352 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 FGL2Q14314 439 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 GALNT3Q14435 633 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PTPRRQ15256 657 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-206ENST00000459895 ZNF284Q2VY69 593 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 ARMC12Q5T9G4 340 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 HORMAD1Q86X24 394 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-206ENST00000459895 DCLK2Q8N568 766 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 FAM71DQ8N9W8 422 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PIGKQ92643 395 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 KLK6Q92876 244 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PBKQ96KB5 322 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 VAT1Q99536 393 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 MIR1-1HGQ9H1L0 117 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 B4GALT6Q9UBX8 382 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PILRBQ9UKJ0 227 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 CHKBQ9Y259 395 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 ZKSCAN5Q9Y2L8 839 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PCDHGA5Q9Y5G8 931 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 NEMP1O14524 444 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 PMPCBO75439 489 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 STK10O94804 968 aaKnown RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 C6P13671 934 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 CTPS1P17812 591 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 CA4P22748 312 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 GRIA4P48058 902 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 SPEM2Q0P670 501 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ELP6Q0PNE2 266 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 WDR45BQ5MNZ6 344 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 PLA2G2CQ5R387 149 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 FAXCQ5TGI0 409 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ITPRIPL1Q6GPH6 555 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 KDELC1Q6UW63 502 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 KDM7AQ6ZMT4 941 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 DPPA4Q7L190 304 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 PRELID2Q8N945 189 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 HCAR2Q8TDS4 363 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 PIH1D2Q8WWB5 315 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 RUBCNQ92622 972 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 C16orf45Q96MC5 204 aaPredicted RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 FCRL5Q96RD9 977 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 MCCC1Q96RQ3 725 aaPredicted RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 MLPHQ9BV36 600 aaPredicted RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 FRMD8P1Q9BZ68 369 aaPredicted RBP12.9□□□□□ -0.34
COL18A1-206ENST00000459895 PCDH9Q9HC56 1237 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 FSCN3Q9NQT6 498 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 TRHDEQ9UKU6 1024 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 CA5BQ9Y2D0 317 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 COQ6Q9Y2Z9 468 aa12.9□□□□□ -0.34
COL18A1-206ENST00000459895 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 A0A1W2PPC4 97 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CTAGE9A4FU28 777 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CES2O00748 559 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 WNT9AO14904 365 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TSPAN6O43657 245 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 OPHN1O60890 802 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 PRLP01236 227 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 GM2AP17900 193 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CES1P23141 567 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CD27P26842 260 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 VIPR1P32241 457 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 HOXD12P35452 270 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 SUOXP51687 545 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 FAM193AP78312 1265 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 OLIG2Q13516 323 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CNGA3Q16281 694 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TMEM52BQ4KMG9 183 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 SETMARQ53H47 684 aaPredicted RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 PAPD7Q5XG87 772 aaKnown RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 NAPEPLDQ6IQ20 393 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TTC27Q6P3X3 843 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms