RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ST3GAL5Q9UNP4 418 aa14.24□□□□□ -0.13
SCFD1-203ENST00000458591 AP4S1Q9Y587 144 aa14.24□□□□□ -0.13
SCFD1-203ENST00000458591 PDCD11Q14690 1871 aaKnown RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 hCG_2014768A0A024R1R8 64 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 ARL5CA6NH57 179 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 ZNF839A8K0R7 811 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 J3KR12 359 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 PSMD12O00232 456 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 UBDO15205 165 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 MATN3O15232 486 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 NPHS1O60500 1241 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 TIPRLO75663 272 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 TMCC1O94876 653 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 TNFAIP8O95379 198 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 SLC4A1P02730 911 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 ITGB1P05556 798 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 THP07101 528 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 COL6A2P12110 1019 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 RANBP1P43487 201 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 LHX1P48742 406 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 WNT3AP56704 352 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 ITKQ08881 620 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 RYBPQ8N488 228 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 NMUR1Q9HB89 426 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 NSMCE4AQ9NXX6 385 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 PHF24Q9UPV7 400 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 CRYL1Q9Y2S2 319 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 ASLP04424 464 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 HSPA13P48723 471 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 CDH15P55291 814 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 CDC42EP1Q00587 391 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 UGP2Q16851 508 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 TMEM259Q4ZIN3 620 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 B3GNT6Q6ZMB0 384 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 AGMOQ6ZNB7 445 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 PLEKHH3Q7Z736 793 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 PTPN18Q99952 460 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 SLC2A11Q9BYW1 496 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 NT5MQ9NPB1 228 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 FAM105AQ9NUU6 356 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
SCFD1-203ENST00000458591 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-203ENST00000458591 C17orf102A2RUQ5 167 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 MYADML2A6NDP7 307 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 TRPC5OSA6NMA1 111 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 TRIM24O15164 1050 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 GPC4O75487 556 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 ANXA9O76027 345 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 IPO13O94829 963 aaKnown RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 SUPT7LO94864 414 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 PRKAA2P54646 552 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 PFKPQ01813 784 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 PABPC1LQ4VXU2 614 aaKnown RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 C6orf10Q5SRN2 563 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 CHSY3Q70JA7 882 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 PIWIL4Q7Z3Z4 852 aaKnown RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 RETREG3Q86VR2 466 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 AHI1Q8N157 1196 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 ASB9Q96DX5 294 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 CPA4Q9UI42 421 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 DSEQ9UL01 958 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 TTC3P53804 2025 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 FAM149AA5PLN7 773 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 IRAK2O43187 625 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 B3GAT3O94766 335 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 SIX3O95343 332 aaPredicted RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 ALDOCP09972 364 aaKnown RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 PRSS56P0CW18 603 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 CHRM3P20309 590 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 CD86P42081 329 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 SLC7A2P52569 658 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 FOXA1P55317 472 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 COG7P83436 770 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 IKBKEQ14164 716 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 RFTN1Q14699 578 aaPredicted RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 HECTD2Q5U5R9 776 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 FUNDC1Q8IVP5 155 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 KLHDC8BQ8IXV7 354 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 OR52K2Q8NGK3 314 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 OR13J1Q8NGT2 312 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 OR6P1Q8NGX9 317 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 KCNA7Q96RP8 456 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 GSTO2Q9H4Y5 243 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 NOL6Q9H6R4 1146 aaKnown RBP14.22□□□□□ -0.13
SCFD1-203ENST00000458591 ZNF696Q9H7X3 374 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 CSNK1G1Q9HCP0 422 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 OSER1Q9NX31 292 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 HS3ST4Q9Y661 456 aa14.22□□□□□ -0.13
SCFD1-203ENST00000458591 A0A1B0GTL3 188 aa14.21□□□□□ -0.13
SCFD1-203ENST00000458591 HAS3O00219 553 aa14.21□□□□□ -0.13
SCFD1-203ENST00000458591 MRASO14807 208 aa14.21□□□□□ -0.13
SCFD1-203ENST00000458591 SLC22A2O15244 555 aa14.21□□□□□ -0.13
SCFD1-203ENST00000458591 HNRNPRO43390 633 aaKnown RBP14.21□□□□□ -0.13
SCFD1-203ENST00000458591 CAPNS1P04632 268 aa14.21□□□□□ -0.13
SCFD1-203ENST00000458591 HSPA1AP0DMV8 641 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms