RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 OPA1O60313 960 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 PRAMEF11O60813 436 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 GIMD1P0DJR0 217 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 MIPP30301 263 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 SUOXP51687 545 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 UCNP55089 124 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 EIF2B5Q13144 721 aaKnown RBP15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 IRF4Q15306 451 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 CDKN3Q16667 212 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 PRRT3Q5FWE3 981 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 FAXCQ5TGI0 409 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 PHACTR4Q8IZ21 702 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 TTC9Q92623 222 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 CENPTQ96BT3 561 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 DEPDC7Q96QD5 511 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 SLC39A8Q9C0K1 460 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 SUV39H2Q9H5I1 410 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 ATP13A3Q9H7F0 1226 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 PDFQ9HBH1 243 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 NCKIPSDQ9NZQ3 722 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 KLF15Q9UIH9 416 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 DOLKQ9UPQ8 538 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 CSNK1G3Q9Y6M4 447 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 BOD1L1Q8NFC6 3051 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 COL12A1Q99715 3063 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 A0A1B0GTH6 734 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 TMEM191CA6NGB0 347 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 LZTS3O60299 673 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 WISP1O95388 367 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 GP1BAP07359 652 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 GZMAP12544 262 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 SKILP12757 684 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 ERCC2P18074 760 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 SERPINA4P29622 427 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 EIF4A3P38919 411 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 YPEL5P62699 121 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 VAC14Q08AM6 782 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 C1orf61Q13536 156 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 LRRC14Q15048 493 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 TCEA2Q15560 299 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 E4F1Q66K89 784 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 FOXR1Q6PIV2 292 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 BRAT1Q6PJG6 821 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 MACC1Q6ZN28 852 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 EFL1Q7Z2Z2 1120 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 TP53I13Q8NBR0 393 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 GLMNQ92990 594 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 VOPP1Q96AW1 172 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 TRIM7Q9C029 511 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 TCEAL2Q9H3H9 227 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 SYNDIG1Q9H7V2 258 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 MRPL47Q9HD33 250 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 PCDH12Q9NPG4 1184 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 MBNL1Q9NR56 388 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 AIPL1Q9NZN9 384 aa15.88■□□□□ 0.13
CHCHD3-204ENST00000457942 COL6A6A6NMZ7 2263 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 PMS2P1A4D2B8 440 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.134e-12■■■■■ 33.5
CHCHD3-204ENST00000457942 PRKCGP05129 697 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 PCCBP05166 539 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 ANXA6P08133 673 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 MYBL1P10243 752 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 PRKCIP41743 596 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 RPIAP49247 311 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 ADKP55263 362 aaKnown RBP15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 PPARDQ03181 441 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 BCL2L1Q07817 233 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 NR0B2Q15466 257 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 UGP2Q16851 508 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 TMEM52BQ4KMG9 183 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 CRTC1Q6UUV9 634 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 SRLQ86TD4 932 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 CAMK1DQ8IU85 385 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 HID1Q8IV36 788 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 CACTIN-AS1Q8N1I8 211 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 TSEN2Q8NCE0 465 aaKnown RBP15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 HCAR2Q8TDS4 363 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 FNIP1Q8TF40 1166 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 ZNF641Q96N77 438 aaPredicted RBP15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 TUBGCP5Q96RT8 1024 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 LRRC61Q9BV99 259 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 ZWILCHQ9H900 591 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 SATB2Q9UPW6 733 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 ATP8A1Q9Y2Q0 1164 aa15.87■□□□□ 0.13
CHCHD3-204ENST00000457942 LY6G6EA0A0G2JKS1 128 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 TSPAN11A1L157 253 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 H3BRJ5 948 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 TOR1BO14657 336 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 MUSKO15146 869 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 LRCH4O75427 683 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 CTSEP14091 401 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 HTR1BP28222 390 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 ARL4AP40617 200 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 LIG3P49916 1009 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 BLKP51451 505 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 ZNF135P52742 658 aaPredicted RBP15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 NFATC3Q12968 1075 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 SMTNL2Q2TAL5 461 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 C6orf132Q5T0Z8 1188 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms