RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 PCDHGA5Q9Y5G8 931 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 GOLGA4Q13439 2230 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 C3orf80F5H4A9 247 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 LATO43561 262 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SOCS5O75159 536 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PRLP01236 227 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PDHA1P08559 390 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SUOXP51687 545 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PPP2CBP62714 309 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 POLR2LP62875 67 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PPP2CAP67775 309 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SKOR1P84550 965 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 CREB5Q02930 508 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 WDR45BQ5MNZ6 344 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 LYSMD4Q5XG99 296 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 DARS2Q6PI48 645 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 ARMCX6Q7L4S7 300 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PID1Q7Z2X4 250 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PRPF39Q86UA1 669 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 TRIM69Q86WT6 500 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SYT12Q8IV01 421 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF567Q8N184 647 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 C17orf53Q8N3J3 647 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 RASGEF1CQ8N431 466 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PIH1D2Q8WWB5 315 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PIGKQ92643 395 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 TADA1Q96BN2 335 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 IMP4Q96G21 291 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 FEM1CQ96JP0 617 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PBKQ96KB5 322 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 WDR24Q96S15 920 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 VAT1Q99536 393 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SLC25A51Q9H1U9 297 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PREBQ9HCU5 417 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 HAUS2Q9NVX0 235 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 DLL3Q9NYJ7 618 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 EIF2B4Q9UI10 523 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 GGT7Q9UJ14 662 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 GMEB2Q9UKD1 530 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 DNPEPQ9ULA0 475 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 ZFR2Q9UPR6 939 aaKnown RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 PPIL1Q9Y3C6 166 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 RAI2Q9Y5P3 530 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 SLCO1B1Q9Y6L6 691 aa10.13□□□□□ -0.79
ATG4A-206ENST00000457035 TP53BP1Q12888 1972 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-206ENST00000457035 A0A1W2PPC4 97 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 A0A1W2PQ67 120 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 A0A1W2PQU0 124 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 UPK3BL1B0FP48 263 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 UPK3BL2E5RIL1 263 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 SMAPO00193 183 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TSPAN6O43657 245 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CEP104O60308 925 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 RNGTTO60942 597 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 NEBLO76041 1014 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 FSBPO95073 299 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PCDH8O95206 1070 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PGLSO95336 258 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 FGGP02679 453 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 SERPINF2P08697 491 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 MSNP26038 577 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CD27P26842 260 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CD86P42081 329 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 GNG11P61952 73 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 OASLQ15646 514 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF284Q2VY69 593 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TMEM52BQ4KMG9 183 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 LRRC73Q5JTD7 316 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 SYCP2LQ5T4T6 812 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CYP2U1Q7Z449 544 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 ADAT2Q7Z6V5 191 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 HORMAD1Q86X24 394 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 RGL4Q8IZJ4 473 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CBARPQ8N350 705 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 COG1Q8WTW3 980 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 FCRL5Q96RD9 977 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 OSBPL9Q96SU4 736 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 RBM15Q96T37 977 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 FRMD8P1Q9BZ68 369 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PARD6AQ9NPB6 346 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PCDH12Q9NPG4 1184 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TRHDEQ9UKU6 1024 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TTC7AQ9ULT0 858 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TPX2Q9ULW0 747 aaKnown RBP10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PHTF1Q9UMS5 762 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 CHKBQ9Y259 395 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 ITM2BQ9Y287 266 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TTLL3Q9Y4R7 772 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 TMEM131Q92545 1883 aa10.12□□□□□ -0.79
ATG4A-206ENST00000457035 C5orf60A6NFR6 353 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MEI4A8MW99 385 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 WNT9AO14904 365 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms