RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OAFQ86UD1 273 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 KCNMB4Q86W47 210 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TEX47Q8TBZ9 253 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DENND1AQ8TEH3 1009 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SPATA13Q96N96 652 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ABCG2Q9UNQ0 655 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PIK3C2BO00750 1634 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 A0A1B0GVI7 797 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ULK1O75385 1050 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L8P0C7I0 530 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PSMB9P28065 219 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GABRB2P47870 512 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 NSUN2Q08J23 767 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 RFTN1Q14699 578 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 MAPKAPK3Q16644 382 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 BRMS1LQ5PSV4 323 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 USP30Q70CQ3 517 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 THAP5Q7Z6K1 395 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 IZUMO1Q8IYV9 350 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF276Q8N554 614 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 OR2T34Q8NGX1 318 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 OR2T3Q8NH03 318 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL32Q96NJ5 620 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CAPN6Q9Y6Q1 641 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HIVEP2P31629 2446 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DOCK4Q8N1I0 1966 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HIST1H2ABP04908 130 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HOXD8P13378 290 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TPSB2P20231 275 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PROZP22891 400 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PDX1P52945 283 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PRR5P85299 388 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TPSAB1Q15661 275 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FAM182AQ5T1J6 154 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GLB1LQ6UWU2 654 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HIST3H2AQ7L7L0 130 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CHST15Q7LFX5 561 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DRAXINQ8NBI3 349 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HIST1H2ACQ93077 130 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HSFY1Q96LI6 401 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 REXO4Q9GZR2 422 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 BARX2Q9UMQ3 279 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 INVSQ9Y283 1065 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 F5H5T6 163 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 OGTO15294 1046 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF432O94892 652 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 OAZ2O95190 189 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 EPB42P16452 691 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 MSR1P21757 451 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PKNOX1P55347 436 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ELF3P78545 371 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HMGN3Q15651 99 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF181Q2M3W8 571 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 C16orf86Q6ZW13 317 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CCDC28AQ8IWP9 274 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PUS3Q9BZE2 481 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 MMP27Q9H306 513 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TAS2R8Q9NYW2 309 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 MTRRQ9UBK8 725 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GRIP1Q9Y3R0 1128 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ABCA7Q8IZY2 2146 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SUPT7LO94864 414 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 POMCP01189 267 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ASGR1P07306 291 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 COX7A2P14406 83 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CD58P19256 250 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LIN52Q52LA3 116 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RPTNQ6XPR3 784 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FAM126AQ9BYI3 521 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PPEF2O14830 753 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PRKYO43930 277 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ATG12O94817 140 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 OR56A5P0C7T3 313 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FAM228BP0C875 321 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ZSCAN5DPP0CG00 497 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 UQCRC1P31930 480 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CCR1P32246 355 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RPL9P32969 192 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 BRCC3P46736 316 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CYCSP99999 105 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CD47Q08722 323 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LAPTM5Q13571 262 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TATDN1Q6P1N9 297 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SHC4Q6S5L8 630 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 S100A7AQ86SG5 101 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RIOX2Q8IUF8 465 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SMARCD1Q96GM5 515 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SPOCK3Q9BQ16 436 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CLCA2Q9UQC9 943 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CDH10Q9Y6N8 788 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 H0YAE9 185 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 KMOO15229 486 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ALDH5A1P51649 535 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PPP4CP60510 307 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FKBP1AP62942 108 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CBLBQ13191 982 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CCNYL2Q5T2Q4 361 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms