RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TMEM114B3SHH9 223 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 H3BMM5 538 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SNX3O60493 162 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HNRNPCL1O60812 293 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PGLSO95336 258 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 GLP2RO95838 553 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CD160O95971 181 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CA3P07451 260 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 VIMP08670 466 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 TROVE2P10155 538 aaKnown RBP eCLIP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ERVK-10P10266 1014 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CSKP41240 450 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SERPINB4P48594 390 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 TTPAP49638 278 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF140P52738 457 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 IRX1P78414 480 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 MPP2Q14168 576 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HSP90AA5PQ58FG0 334 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PITRM1Q5JRX3 1037 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 FSTL4Q6MZW2 842 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 NUDT18Q6ZVK8 323 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 GPR149Q86SP6 731 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CILP2Q8IUL8 1156 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 OR2AP1Q8NGE2 309 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SMG7Q92540 1137 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF75CPQ92670 426 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 MYEOVQ96EZ4 313 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 GDF15Q99988 308 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PITPNM3Q9BZ71 974 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 MANSC1Q9H8J5 431 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 NOD2Q9HC29 1040 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SMPD4Q9NXE4 827 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 KCTD5Q9NXV2 234 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 DKK3Q9UBP4 350 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 APPL1Q9UKG1 709 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 RAI2Q9Y5P3 530 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HCFC2Q9Y5Z7 792 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 TSPAN11A1L157 253 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 EDF1O60869 148 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 USP12O75317 370 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ATP5HO75947 161 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 KIAA0754O94854 1291 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 VAPBO95292 243 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ALDOAP04075 364 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 RBP1P09455 135 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PABPC1P11940 636 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 STMN1P16949 149 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HMGCLP35914 325 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SKIV2L2P42285 1042 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC12A2P55011 1212 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 RAB10P61026 200 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 BCL2L1Q07817 233 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 LMAN2Q12907 356 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 POU6F1Q14863 301 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SHHQ15465 462 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CNGA3Q16281 694 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 GPR33Q49SQ1 333 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 MROH9Q5TGP6 573 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 UGT3A1Q6NUS8 523 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 BRAT1Q6PJG6 821 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 C6orf89Q6UWU4 347 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CIR1Q86X95 450 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ADGRG2Q8IZP9 1017 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 C4orf33Q8N1A6 199 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 CHCHD4Q8N4Q1 142 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 DCLK2Q8N568 766 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ANKRD42Q8N9B4 389 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PDCD6IPQ8WUM4 868 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 LRRN4Q8WUT4 740 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HEXDCQ8WVB3 486 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SEC16BQ96JE7 1060 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ACTR5Q9H9F9 607 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SNX15Q9NRS6 342 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 IARS2Q9NSE4 1012 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 SORCS3Q9UPU3 1222 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 ACOT9Q9Y305 439 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PCDHB1Q9Y5F3 818 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 DENND4AQ7Z401 1863 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 DNAH12Q6ZR08 3092 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 SCN8AQ9UQD0 1980 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 CENPFP49454 3210 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 TCP11X1B4DZS4 312 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 SLCO1B7G3V0H7 640 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 EIF3FO00303 357 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 TRAFD1O14545 582 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 TSPAN3O60637 253 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 PLIN3O60664 434 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 DCTN3O75935 186 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 BPGMP07738 259 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 SPATA31D3P0C874 917 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 EPCAMP16422 314 aa6.86□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF30P17039 623 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms