RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SLC7A4O43246 635 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 BNIP3LO60238 219 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 CPP00450 1065 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 IGLV3-19P01714 112 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PSMA3P25788 255 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 NFKBIAP25963 317 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 HOXA6P31267 233 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 GRIA1P42261 906 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 TERF1P54274 439 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PLTPP55058 493 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 CCDC15Q0P6D6 951 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 SFSWAPQ12872 951 aaKnown RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 SPARCL1Q14515 664 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PCSK7Q16549 785 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 UGP2Q16851 508 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 USP30Q70CQ3 517 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 TMPRSS6Q8IU80 811 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 MMAAQ8IVH4 418 aaKnown RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 CAMKK1Q8N5S9 505 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PEX13Q92968 403 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 ARRDC3Q96B67 414 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 SCRN2Q96FV2 425 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 MRGPRX1Q96LB2 322 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 IL22Q9GZX6 179 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 NEUROG2Q9H2A3 272 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 EPC1Q9H2F5 836 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 PABPC3Q9H361 631 aaKnown RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 TRABDQ9H4I3 376 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 MAGEE1Q9HCI5 957 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 HACD3Q9P035 362 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 EBF1Q9UH73 591 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 CHKBQ9Y259 395 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 MAGEB16A2A368 324 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CAPN8A6NHC0 703 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 UPK3BL1B0FP48 263 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 C10orf142B7Z368 130 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 UPK3BL2E5RIL1 263 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 KPNA3O00505 521 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 AP1G1O43747 822 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 USP12O75317 370 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 IL1BP01584 269 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 TIMP2P16035 220 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 GABRG2P18507 467 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 SLC8A1P32418 973 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 DRD3P35462 400 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CHRNA4P43681 627 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 NEK3P51956 506 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 ARL4CP56559 192 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 VSNL1P62760 191 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 OLIG2Q13516 323 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 LAMB3Q13751 1172 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 HIF1AQ16665 826 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CDKN3Q16667 212 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 PIP5KL1Q5T9C9 394 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 PARS2Q7L3T8 475 aaKnown RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 KBTBD6Q86V97 674 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CBARPQ8N350 705 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 BRSK1Q8TDC3 778 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 FMO2Q99518 471 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 MRM3Q9HC36 420 aaKnown RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 BFARQ9NZS9 450 aa11.31□□□□□ -0.6
TRAF4-206ENST00000454852 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 V9GYY5 206 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-206ENST00000454852 CCDC163A0A0D9SF12 145 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 H0Y858 1186 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 SPINT1O43278 529 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 PDGFBP01127 241 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 DNTTP04053 509 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CYP2A6P11509 494 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ADRB3P13945 408 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ZNF30P17039 623 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 NDUFV2P19404 249 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ADRA1DP25100 572 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 PSMD8P48556 350 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CCR3P51677 355 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CREB5Q02930 508 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 MTAPQ13126 283 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 GALNT3Q14435 633 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms