RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 INSIG1O15503 277 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 KRT34O76011 436 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PIGNO95427 931 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 TIMP1P01033 207 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 APOA4P06727 396 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 T-ENOLP0DO92 83 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PPM1AP35813 382 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 KPNA2P52292 529 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 PABPC1LQ4VXU2 614 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 FSCBQ5H9T9 825 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 ATXN7L2Q5T6C5 722 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 TEX26Q8N6G2 289 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 OR4K2Q8NGD2 314 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 HEXDCQ8WVB3 486 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 OVCA2Q8WZ82 227 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 TMEM106CQ9BVX2 250 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 ILKAPQ9H0C8 392 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 ILVBLA1L0T0 632 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 CCDC162PA2VCL2 907 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 CCL16O15467 120 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 GSRP00390 522 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PRSS56P0CW18 603 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 EZRP15311 586 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 MPSTP25325 297 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PTPN4P29074 926 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 GEN1Q17RS7 908 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 HECTD2Q5U5R9 776 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PLPP4Q5VZY2 271 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 NECAB2Q7Z6G3 386 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 RAI2Q9Y5P3 530 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 FNDC1Q4ZHG4 1894 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 KDELR3O43731 214 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 C8AP07357 584 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PDHA1P08559 390 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 ARHGAP8P85298 464 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PTPRRQ15256 657 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PDCD2Q16342 344 aaPredicted RBP13.73□□□□□ -0.21
CLK3-203ENST00000454830 PIM3Q86V86 326 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 VWA7Q9Y334 891 aa13.73□□□□□ -0.21
CLK3-203ENST00000454830 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 A8MX80 341 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 SPECC1L-ADORA2AF8WAN1 911 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 TGM5O43548 720 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 TMCC1O94876 653 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CRTAMO95727 393 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 SKIV2L2P42285 1042 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 POU4F1Q01851 419 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 FRG1Q14331 258 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 KLHL23Q8NBE8 558 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 OLFM1Q99784 485 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 ARNT2Q9HBZ2 717 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 MRM3Q9HC36 420 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 CATSPERZQ9NTU4 200 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 GREB1Q4ZG55 1949 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 G3V2L1 256 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 NDUFS3O75489 264 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CTPS1P17812 591 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CSKP41240 450 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CLCN5P51795 746 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 MRPL46Q9H2W6 279 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 POMKQ9H5K3 350 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 COMMD10Q9Y6G5 202 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 MEI4A8MW99 385 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 SLC7A4O43246 635 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CALB2P22676 271 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 RFC2P35250 354 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms