RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PCID2Q5JVF3 399 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZBTB49Q6ZSB9 765 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZNF333Q96JL9 665 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZNHIT2Q9UHR6 403 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 BTN3A1O00481 513 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 STX7O15400 261 aaKnown RBP11.24□□□□□ -0.61
DDR1-240ENST00000454612 GLP2RO95838 553 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 JUNP05412 331 aaKnown RBP11.24□□□□□ -0.61
DDR1-240ENST00000454612 CNTFP26441 200 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 RAB10P61026 200 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 CDC42EP1Q00587 391 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 TAF10Q12962 218 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 C6orf183Q5T699 404 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 C4orf22Q6V702 233 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 DENND1CQ8IV53 801 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 UBR7Q8N806 425 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ACOX2Q99424 681 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 TMEM79Q9BSE2 394 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZFYVE28Q9HCC9 887 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 TMLHEQ9NVH6 421 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 UNCXA6NJT0 531 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 PTGESO14684 152 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ASGR1P07306 291 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
DDR1-240ENST00000454612 CKMT2P17540 419 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 GATMP50440 423 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 SERPINH1P50454 418 aaKnown RBP11.24□□□□□ -0.61
DDR1-240ENST00000454612 SLC7A2P52569 658 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 LIMK2P53671 638 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 FOLH1Q04609 750 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 VPS26BQ4G0F5 336 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 SFT2D3Q587I9 215 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 GDF6Q6KF10 455 aaPredicted RBP11.24□□□□□ -0.61
DDR1-240ENST00000454612 TPGS1Q6ZTW0 290 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 TTC9BQ8N6N2 239 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 RAET1EQ8TD07 263 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ASIC4Q96FT7 647 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 HMCESQ96FZ2 354 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 GLT1D1Q96MS3 346 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ING2Q9H160 280 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 S100A14Q9HCY8 104 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ZNF212Q9UDV6 495 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 FBXW11Q9UKB1 542 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 TRPV2Q9Y5S1 764 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ARL5AQ9Y689 179 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 PSMD12O00232 456 aaPredicted RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 MTSS1O43312 755 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PQBP1O60828 265 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 OR6B1O95007 311 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 CHEK2O96017 543 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 HLA-DQB2P05538 268 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 LYNP07948 512 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 AKR1A1P14550 325 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PRKCHP24723 683 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 NPY2RP49146 381 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 CREB5Q02930 508 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 LBRQ14739 615 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 PDK3Q15120 406 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 IMPG1Q17R60 797 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 MBLAC2Q68D91 279 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 ZNF554Q86TJ5 538 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 TTC30BQ8N4P2 665 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 CDYL2Q8N8U2 506 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 ZNF398Q8TD17 642 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 GFM2Q969S9 779 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 CCDC138Q96M89 665 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 THUMPD3Q9BV44 507 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 NOL11Q9H8H0 719 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 CNGB3Q9NQW8 809 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PNMA8BQ9ULN7 279 aaPredicted RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 MCM3APO60318 1980 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 SMIM35A0A1B0GVV1 85 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 LRPAP1P30533 357 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PTRHD1Q6GMV3 140 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 MARK2Q7KZI7 788 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
DDR1-240ENST00000454612 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 TEKT5Q96M29 485 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 GKN1Q9NS71 199 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 COMMD3-BMI1R4GMX3 469 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 PRRG1O14668 218 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 DLX3O60479 287 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 MPOP05164 745 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 ZNF23P17027 643 aa11.23□□□□□ -0.61
DDR1-240ENST00000454612 FOXB2Q5VYV0 432 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms