RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ATMINO43313 823 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CREB3O43889 395 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 IGSF6O95976 241 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PLEKP08567 350 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PRKAR1AP10644 381 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CTSEP14091 401 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RHOQP17081 205 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CHRNB2P17787 502 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TNFAIP3P21580 790 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 XPAP23025 273 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EPHB2P29323 1055 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SDC4P31431 198 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CSF2RBP32927 897 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CDH5P33151 784 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PPP1R2P41236 205 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GABRB2P47870 512 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LIG3P49916 1009 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CSRP3P50461 194 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SRP54P61011 504 aaKnown RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TLE1Q04724 770 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC15Q0P6D6 951 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RALGDSQ12967 914 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NFATC4Q14934 902 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LRRC14Q15048 493 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TBR1Q16650 682 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MAN2A1Q16706 1144 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MANEAQ5SRI9 462 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CERCAMQ5T4B2 595 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ATP1A1-AS1Q5TC04 95 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NKAIN2Q5VXU1 208 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HIST2H2BCQ6DN03 193 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZNF783Q6ZMS7 281 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ARHGAP36Q6ZRI8 547 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TAF8Q7Z7C8 310 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TRIM74Q86UV6 250 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DNAAF5Q86Y56 855 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DCP2Q8IU60 420 aaKnown RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CAMK1DQ8IU85 385 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NPWQ8N729 165 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 USP7Q93009 1102 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SGF29Q96ES7 293 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 WBP1Q96G27 269 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC74BQ96LY2 380 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LENG8Q96PV6 779 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HAPLN3Q96S86 360 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LGR4Q9BXB1 951 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EDEM3Q9BZQ6 932 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EPN3Q9H201 632 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LRRN3Q9H3W5 708 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FAM207AQ9NSI2 230 aaPredicted RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 STARD5Q9NSY2 213 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM248Q9NWD8 314 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NCKIPSDQ9NZQ3 722 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM9Q9P0T7 183 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MOSPD1Q9UJG1 213 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NOCTQ9UK39 431 aaKnown RBP6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MFHAS1Q9Y4C4 1052 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CENPEQ02224 2701 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GTPBP10A4D1E9 387 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GOLGA6CA6NDK9 693 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GOLGA6BA6NDN3 693 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C2CD4BA6NLJ0 364 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RASA4BC9J798 803 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 J3KR12 359 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCP110O43303 1012 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RASA4O43374 803 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DUX1O43812 170 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 BUB1BO60566 1050 aaPredicted RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LSM8O95777 96 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 F9P00740 461 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GOLGA6DP0CG33 693 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LIPCP11150 499 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 UCHL3P15374 230 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GM2AP17900 193 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 AK4P27144 223 aaPredicted RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCKBRP32239 447 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ADRA1BP35368 520 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MAPKAPK2P49137 400 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 OR1D5P58170 312 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FMO1Q01740 532 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PTK2BQ14289 1009 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ELOCQ15369 112 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TPD52L1Q16890 204 aaPredicted RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CFAP58Q5T655 872 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 KLHDC7AQ5VTJ3 777 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DENND2CQ68D51 928 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SPECC1LQ69YQ0 1117 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DOK6Q6PKX4 331 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SLC30A9Q6PML9 568 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZDHHC17Q8IUH5 632 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SLITRK4Q8IW52 837 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TP53INP2Q8IXH6 220 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 UNC5BQ8IZJ1 945 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FSTL5Q8N475 847 aaPredicted RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PAF1Q8N7H5 531 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RTL3Q8N8U3 475 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms