RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 NR1H3Q13133 447 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PTPRRQ15256 657 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CNGA3Q16281 694 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CDKN3Q16667 212 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MYLK3Q32MK0 819 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CARD16Q5EG05 197 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TSTD2Q5T7W7 516 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GRAMD4Q6IC98 578 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 KIAA0930Q6ICG6 404 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 DPY19L3Q6ZPD9 716 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SH2D5Q6ZV89 423 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TRABD2AQ86V40 505 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SLC26A11Q86WA9 606 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 LRRC6Q86X45 466 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CAMK1DQ8IU85 385 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 YAF2Q8IY57 180 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TTC30BQ8N4P2 665 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CPA6Q8N4T0 437 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PPM1NQ8N819 430 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CHST14Q8NCH0 376 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PPHLN1Q8NEY8 458 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MDGA1Q8NFP4 955 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 OR13J1Q8NGT2 312 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 OR2A12Q8NGT7 310 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 OR6K2Q8NGY2 324 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TTC8Q8TAM2 541 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 BRSK1Q8TDC3 778 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SPOCK2Q92563 424 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PTPRN2Q92932 1015 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 NXPE3Q969Y0 559 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ECHDC3Q96DC8 303 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MRRFQ96E11 262 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GAS2L1Q99501 681 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MCMBPQ9BTE3 642 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TRMT61BQ9BVS5 477 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CENPHQ9H3R5 247 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ELOVL2Q9NXB9 296 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SAMD15Q9P1V8 674 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SLC17A6Q9P2U8 582 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PSMC3IPQ9P2W1 217 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 DEC1Q9P2X7 70 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TBK1Q9UHD2 729 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF180Q9UJW8 692 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 RIMKLBQ9ULI2 386 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PPIL1Q9Y3C6 166 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PSAT1Q9Y617 370 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 NUMBLQ9Y6R0 609 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 BPTFQ12830 3046 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 C2CD4DB7Z1M9 353 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TIMM44O43615 452 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 VAPBO95292 243 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 POP4O95707 220 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ATP5BP06576 529 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CHRM1P11229 460 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 GABRB3P28472 473 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 EIF2DP41214 584 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 MAPK8P45983 427 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ARSDP51689 593 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CCNHP51946 323 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF140P52738 457 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 RPL26P61254 145 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PPP2R2AP63151 447 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CBX1P83916 185 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 KDSRQ06136 332 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 BCL2L1Q07817 233 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 SMAD4Q13485 552 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 NAB1Q13506 487 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 SEPT6Q14141 434 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 MPP2Q14168 576 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PTPRCAPQ14761 206 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TMED2Q15363 201 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TAF1AQ15573 450 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 SKIDA1Q1XH10 827 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 AAK1Q2M2I8 961 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ITPRIPL2Q3MIP1 535 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ACCSLQ4AC99 568 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 HSP90AA5PQ58FG0 334 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ARMC12Q5T9G4 340 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PDPK2PQ6A1A2 396 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PACS1Q6VY07 963 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 KDM7AQ6ZMT4 941 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 Q6ZVU0 165 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 NLRP9Q7RTR0 991 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 KCNMB4Q86W47 210 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CNTN4Q8IWV2 1026 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CTAGE3PQ8IX95 158 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TERB1Q8NA31 727 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 KDM1BQ8NB78 822 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 LPCAT1Q8NF37 534 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 OR13C4Q8NGS5 318 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 BLOC1S5Q8TDH9 187 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 STYXQ8WUJ0 223 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PEX13Q92968 403 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 EID2BQ96D98 161 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 RMDN1Q96DB5 314 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TUBGCP5Q96RT8 1024 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 AGAP2Q99490 1192 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms