RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 ANAPC7Q9UJX3 599 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 TPP1O14773 563 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 MT-CO3P00414 261 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 PRKCGP05129 697 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 GP1BAP07359 652 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 RARAP10276 462 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 MYF5P13349 255 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 AMPD1P23109 780 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 HTR1BP28222 390 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 MMP12P39900 470 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
CHD3-206ENST00000452447 RGRP47804 291 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 LIG3P49916 1009 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 BLKP51451 505 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 SEMG2Q02383 582 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 DEFB133Q30KQ1 61 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 PRRT3Q5FWE3 981 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 TMCO4Q5TGY1 634 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
CHD3-206ENST00000452447 MACC1Q6ZN28 852 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 PHACTR4Q8IZ21 702 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 DCBLD1Q8N8Z6 715 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 HNRNPLLQ8WVV9 542 aaKnown RBP12.98□□□□□ -0.33
CHD3-206ENST00000452447 GLMNQ92990 594 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 PSKH2Q96QS6 385 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 SALL4Q9UJQ4 1053 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 ATRXP46100 2492 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 UNC13CQ8NB66 2214 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 A0A087X0T9 212 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 MYO1FO00160 1098 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 FAM228BP0C875 321 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 TCF4P15884 667 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 SERPINB6P35237 376 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 PEX5P50542 639 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 AP1S1P61966 158 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 SLC10A7Q0GE19 358 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 KRT81Q14533 505 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 ZNF235Q14590 738 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 RTP5Q14D33 572 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 CDKN3Q16667 212 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 WSCD2Q2TBF2 565 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 ZSWIM9Q86XI8 627 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 RBFAQ8N0V3 343 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 BBS5Q8N3I7 341 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 IFI44Q8TCB0 444 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
CHD3-206ENST00000452447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■■■■□ 23.4
CHD3-206ENST00000452447 LOC400499M0QZD8 3231 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 CPED1A4D0V7 1026 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 MUSKO15146 869 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 OPA1O60313 960 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 GCATO75600 419 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 GYPCP04921 128 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 CYP1A2P05177 515 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ANXA6P08133 673 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ELFN1P0C7U0 828 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 HSPA9P38646 679 aaKnown RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 RPIAP49247 311 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 C1orf61Q13536 156 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 INPP5AQ14642 412 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 HADHQ16836 314 aaKnown RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ENPP7Q6UWV6 458 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 HID1Q8IV36 788 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ATPAF2Q8N5M1 289 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ATL2Q8NHH9 583 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 MAPK15Q8TD08 544 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ECHDC3Q96DC8 303 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 TBATAQ96M53 351 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 LRRC61Q9BV99 259 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ETNK2Q9NVF9 386 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 DOLKQ9UPQ8 538 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 ARHGEF17Q96PE2 2063 aaPredicted RBP12.97□□□□□ -0.33
CHD3-206ENST00000452447 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
CHD3-206ENST00000452447 LY6G6EA0A0G2JKS1 128 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 LMO7DNF2Z398 122 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 PCCBP05166 539 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 CTSEP14091 401 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 NFKBIAP25963 317 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 CASP14P31944 242 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms