RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ARHGAP15Q53QZ3 475 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 RAP1GAP2Q684P5 730 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 FBXL22Q6P050 247 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 CCDC91Q7Z6B0 441 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 PLD6Q8N2A8 252 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.81□□□□□ -0.681e-11■□□□□ 8.2
PKP4-206ENST00000452162 ACVR1CQ8NER5 493 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 PPHLN1Q8NEY8 458 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 PTCD3Q96EY7 689 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 IMP4Q96G21 291 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 VPS39Q96JC1 886 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ASB16Q96NS5 453 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 GPR22Q99680 433 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ATP13A1Q9HD20 1204 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 FBXO6Q9NRD1 293 aaPredicted RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 ZNF358Q9NW07 568 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 COPG2Q9UBF2 871 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 MUTYHQ9UIF7 546 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 SLC12A8A0AV02 714 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 CCDC78A2IDD5 438 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 C2orf78A6NCI8 922 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ANHXE9PGG2 379 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 J3KR12 359 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ITM2AO43736 263 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 HNRNPCL1O60812 293 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 SIN3BO75182 1162 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ARNTP27540 789 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ARCN1P48444 511 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 WNT3AP56704 352 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 DLG2Q15700 870 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 CCDC153Q494R4 210 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TANGO2Q6ICL3 276 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ZC3HC1Q86WB0 502 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 C10orf107Q8IVU9 208 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TEX26Q8N6G2 289 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 OR6Y1Q8NGX8 325 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 MAGEC3Q8TD91 643 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 MRPS31Q92665 395 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 RAB3IPQ96QF0 476 aaPredicted RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 SLC22A12Q96S37 553 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 CYP2S1Q96SQ9 504 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 KXD1Q9BQD3 176 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 SMG9Q9H0W8 520 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 RHOJQ9H4E5 214 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TASP1Q9H6P5 420 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 CAB39LQ9H9S4 337 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 NOD2Q9HC29 1040 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TREX1Q9NSU2 369 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 ARL8BQ9NVJ2 186 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 DONSONQ9NYP3 566 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 TRPM5Q9NZQ8 1165 aa10.81□□□□□ -0.68
PKP4-206ENST00000452162 HELZP42694 1942 aaKnown RBP10.81□□□□□ -0.68
PKP4-206ENST00000452162 A0A096LPK6 155 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 E2F8A0AVK6 867 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ZNF840PA6NDX5 716 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 FCHO1O14526 889 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 CLGNO14967 610 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 SERPINE1P05121 402 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 C2P06681 752 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 HMBSP08397 361 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 FCARP24071 287 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 GABRB3P28472 473 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 HADHAP40939 763 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 VIPR2P41587 438 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 CHRNA4P43681 627 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 RENBPP51606 427 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 IRF9Q00978 393 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ZBTB16Q05516 673 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 GRM3Q14832 879 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 KRT72Q14CN4 511 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ACBD5Q5T8D3 534 aaPredicted RBP10.8□□□□□ -0.68
PKP4-206ENST00000452162 ARMC3Q5W041 872 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ESRP1Q6NXG1 681 aaKnown RBP10.8□□□□□ -0.68
PKP4-206ENST00000452162 TTC7BQ86TV6 843 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
PKP4-206ENST00000452162 PPP1R14CQ8TAE6 165 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 SMARCD2Q92925 531 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 FSD1LQ9BXM9 530 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 PLA2G2FQ9BZM2 168 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 CCSER2Q9H7U1 834 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ARNT2Q9HBZ2 717 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 A8MUI8 341 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 LYPLA1O75608 230 aaPredicted RBP10.8□□□□□ -0.68
PKP4-206ENST00000452162 NEBLO76041 1014 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 MMP2P08253 660 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 GRK2P25098 689 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 SLC1A6P48664 564 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 RASSF2P50749 326 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 SLC10A7Q0GE19 358 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 IHHQ14623 411 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 ATG14Q6ZNE5 492 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 TADA1Q96BN2 335 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 RSPRY1Q96DX4 576 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 MYEOVQ96EZ4 313 aa10.8□□□□□ -0.68
PKP4-206ENST00000452162 TUBB6Q9BUF5 446 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms