RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SLC10A7Q0GE19 358 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 RALGDSQ12967 914 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 WSCD2Q2TBF2 565 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 TMCO4Q5TGY1 634 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 ZCCHC8Q6NZY4 707 aaKnown RBP12.57□□□□□ -0.4
CPSF4-208ENST00000452047 ALKBH5Q6P6C2 394 aaKnown RBP12.57□□□□□ -0.4
CPSF4-208ENST00000452047 RBFAQ8N0V3 343 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 DCBLD1Q8N8Z6 715 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 NXPE2Q96DL1 559 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 TBATAQ96M53 351 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 ZNF599Q96NL3 588 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-208ENST00000452047 USP29Q9HBJ7 922 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 PCDH18Q9HCL0 1135 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
CPSF4-208ENST00000452047 IP6K2Q9UHH9 426 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 CLCA2Q9UQC9 943 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 ASXL3Q9C0F0 2248 aa12.57□□□□□ -0.4
CPSF4-208ENST00000452047 URB1O60287 2271 aaKnown RBP12.57□□□□□ -0.4
CPSF4-208ENST00000452047 BPTFQ12830 3046 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 TPP1O14773 563 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 MAFKO60675 156 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 GCATO75600 419 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 PRKCGP05129 697 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 GP1BAP07359 652 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 CR2P20023 1033 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 PTMSP20962 102 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 CASP14P31944 242 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 EIF4A3P38919 411 aaKnown RBP12.56□□□□□ -0.4
CPSF4-208ENST00000452047 LIG3P49916 1009 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 AP1S1P61966 158 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 E2F1Q01094 437 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 SEMG2Q02383 582 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 LBRQ14739 615 aaKnown RBP12.56□□□□□ -0.4
CPSF4-208ENST00000452047 RTP5Q14D33 572 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 LRRC14Q15048 493 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 ERAP2Q6P179 960 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 TMCO3Q6UWJ1 677 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 PHACTR4Q8IZ21 702 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 FAM71BQ8TC56 605 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 LMX1AQ8TE12 382 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 BTN2A2Q8WVV5 523 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 LRRC61Q9BV99 259 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
CPSF4-208ENST00000452047 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
CPSF4-208ENST00000452047 RP1P56715 2156 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 CFAP69A5D8W1 941 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 LMO7DNF2Z398 122 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 OPA1O60313 960 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 GM2AP17900 193 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 IL4RP24394 825 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 PEX5P50542 639 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 SCNN1BP51168 640 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 RENBPP51606 427 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 ARSEP51690 589 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 INPP5AQ14642 412 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 PRRT3Q5FWE3 981 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 CDCP2Q5VXM1 449 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 LIPIQ6XZB0 460 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 CPNE8Q86YQ8 564 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 PGBD5Q8N414 524 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 ZNF564Q8TBZ8 553 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-208ENST00000452047 MGME1Q9BQP7 344 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 BOCQ9BWV1 1114 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 CLPBQ9H078 707 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-208ENST00000452047 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
CPSF4-208ENST00000452047 A0A087WV48 116 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-208ENST00000452047 MYO1FO00160 1098 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-208ENST00000452047 LZTS3O60299 673 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-208ENST00000452047 SOCS5O75159 536 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 MT-CO3P00414 261 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 CD48P09326 243 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 TSHRP16473 764 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 SERPINB6P35237 376 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
CPSF4-208ENST00000452047 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-208ENST00000452047 HK3P52790 923 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 PPARDQ03181 441 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 MTM1Q13496 603 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 C1orf61Q13536 156 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 ZNF235Q14590 738 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 NFATC4Q14934 902 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 ALG11Q2TAA5 492 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 ASTE1Q2TB18 679 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms