RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GYS1P13807 737 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ATP6V1B2P21281 511 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MLLT3P42568 568 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ANXA11P50995 505 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CD81P60033 236 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RPL19P84098 196 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC25A3Q00325 362 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRKCDQ05655 676 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MOGSQ13724 837 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRKD1Q15139 912 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TAF5Q15542 800 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 USF2Q15853 346 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 BCL2A1Q16548 175 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NRF1Q16656 503 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PTPROQ16827 1216 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 IMPG1Q17R60 797 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 INTS6LQ5JSJ4 861 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 GPATCH4Q5T3I0 446 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 FAXCQ5TGI0 409 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PIK3R6Q5UE93 754 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AGAP6Q5VW22 663 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DRICH1Q6PGQ1 229 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 USP49Q70CQ1 688 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RAB11FIP2Q7L804 512 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SPATA19Q7Z5L4 167 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RIOX2Q8IUF8 465 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC15A3Q8IY34 581 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LRRC47Q8N1G4 583 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CCNYL1Q8N7R7 359 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF781Q8N8C0 355 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC43A3Q8NBI5 491 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF540Q8NDQ6 660 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ETNPPLQ8TBG4 499 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SPATA18Q8TC71 538 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 STON2Q8WXE9 905 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ASB12Q8WXK4 309 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PIGKQ92643 395 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 REXO5Q96IC2 774 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM20AQ96MK3 541 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GLT1D1Q96MS3 346 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AGAP4Q96P64 663 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC30A2Q9BRI3 323 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 C1QTNF1Q9BXJ1 281 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 IL22Q9GZX6 179 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ARMT1Q9H993 441 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 C17orf75Q9HAS0 396 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SMURF2Q9HAU4 748 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RC3H2Q9HBD1 1191 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 KLHL21Q9UJP4 597 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CPSF3Q9UKF6 684 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CNOT6Q9ULM6 557 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 KIAA1024Q9UPX6 916 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 REXO2Q9Y3B8 237 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CMAHPQ9Y471 501 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF175Q9Y473 711 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GMPPBQ9Y5P6 360 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 N4BP2Q86UW6 1770 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 XDHP47989 1333 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRAMEF33A0A0G2JMD5 474 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 KANTRA0A1W2PQU2 76 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 MYO1GB0I1T2 1018 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 HACD1B0YJ81 288 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 G3V2T6 193 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 STK25O00506 426 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 NEMP1O14524 444 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 FPGTO14772 594 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 PPEF1O14829 653 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 BCKDKO14874 412 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 HS6ST1O60243 411 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 PRAMEF10O60809 474 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 PTCD1O75127 700 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 BCAS2O75934 225 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 PROSCO94903 275 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 BPGMP07738 259 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 NAT2P11245 290 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 COL6A2P12110 1019 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 CYP11B1P15538 503 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TNNI1P19237 187 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 PVALBP20472 110 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 RRM1P23921 792 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 LCN1P31025 176 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 RBM34P42696 430 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 CAPZA2P47755 286 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 VEGFCP49767 419 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 EIF4A1P60842 406 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 MGAT5Q09328 741 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TRIM28Q13263 835 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 ZNF267Q14586 743 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 POU6F1Q14863 301 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 RAB39AQ14964 217 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TOMM20Q15388 145 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TXNRD1Q16881 649 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 SYT16Q17RD7 645 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 HKDC1Q2TB90 917 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 UGT3A2Q3SY77 523 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 RABL3Q5HYI8 236 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 EFHC2Q5JST6 749 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.21□□□□□ -2.05
USP53-202ENST00000450251 LMBRD2Q68DH5 695 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 PET117Q6UWS5 81 aa2.21□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms