RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 FAM193AP78312 1265 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 BCL2L1Q07817 233 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 POU6F1Q14863 301 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CRYMQ14894 314 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FNDC3BQ53EP0 1204 aaKnown RBP12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CARD16Q5EG05 197 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CERCAMQ5T4B2 595 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ARMC3Q5W041 872 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 UNC5AQ6ZN44 842 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CCNJLQ8IV13 435 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PALM2Q8IXS6 379 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 LPCAT1Q8NF37 534 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FLCNQ8NFG4 579 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 OR2W6PQ8NHA6 318 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 UHMK1Q8TAS1 419 aaKnown RBP12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FRS2Q8WU20 508 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 UCMAQ8WVF2 138 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TUBGCP5Q96RT8 1024 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZDHHC6Q9H6R6 413 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SLCO3A1Q9UIG8 710 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SOX13Q9UN79 622 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TCAF1Q9Y4C2 921 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 BPTFQ12830 3046 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TBC1D3BA6NDS4 549 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 WASH3PC4AMC7 463 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TIMM44O43615 452 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 BNIP3LO60238 219 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FZD6O60353 706 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SHBGP04278 402 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GSTA2P09210 222 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TPH1P17752 444 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SSTR1P30872 391 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 STX2P32856 288 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RECQLP46063 649 aaPredicted RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GRIA4P48058 902 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EIF3BP55884 814 aaKnown RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZNF844Q08AG5 666 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SEPT6Q14141 434 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZNF234Q14588 700 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GRM3Q14832 879 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SPANXN3Q5MJ09 141 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 DPY19L3Q6ZPD9 716 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 NUDT18Q6ZVK8 323 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 IQCKQ8N0W5 287 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SLC44A3Q8N4M1 653 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 DTWD2Q8NBA8 298 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 OR2A12Q8NGT7 310 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PDCD6IPQ8WUM4 868 aaKnown RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZNF669Q96BR6 464 aaPredicted RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RANBP9Q96S59 729 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TRIM56Q9BRZ2 755 aaKnown RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ACSS3Q9H6R3 686 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 C8orf33Q9H7E9 229 aaPredicted RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MRM3Q9HC36 420 aaKnown RBP12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CHKBQ9Y259 395 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 NFS1Q9Y697 457 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PIAS3Q9Y6X2 628 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EDDM13A0A1B0GTR0 161 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 FAM237BA0A1B0GVD1 139 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EXOC1LA0A1B0GW35 172 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TCRBV9S1A1TA0A576 114 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 HEATR9A2RTY3 570 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 HTRA2O43464 458 aaPredicted RBP12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PI15O43692 258 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 USP1O94782 785 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PGLSO95336 258 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PRLP01236 227 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PRKCGP05129 697 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 POLBP06746 335 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 IVLP07476 585 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GKP32189 559 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RAD51Q06609 339 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 KLHL38Q2WGJ6 581 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 PCID2Q5JVF3 399 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ARMC12Q5T9G4 340 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 EGFLAMQ63HQ2 1017 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 TXNDC11Q6PKC3 985 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 SERPINA13PQ6UXR4 307 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 ZNF366Q8N895 744 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 CHST14Q8NCH0 376 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 GRIN3AQ8TCU5 1115 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 VOPP1Q96AW1 172 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 MSANTD3Q96H12 275 aa12.79□□□□□ -0.36
HLA-DRB9-201ENST00000449413 KIFC1Q9BW19 673 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms