RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
SHC1-210ENST00000448116 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
SHC1-210ENST00000448116 ARHGEF37A1IGU5 675 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TPST1O60507 370 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 IPO13O94829 963 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 HOXD8P13378 290 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 PGFP49763 221 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 MTX3Q5HYI7 312 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 RAB41Q5JT25 222 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 KRT80Q6KB66 452 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 SCN4BQ8IWT1 228 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 NACA2Q9H009 215 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 NOL11Q9H8H0 719 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 EML4Q9HC35 981 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 FAM105AQ9NUU6 356 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 GIMAP2Q9UG22 337 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 A0A087X1B8 175 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 PRORSD1PA6NEY8 169 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 OR51F1A6NGY5 319 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 ZNF839A8K0R7 811 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 MATN3O15232 486 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 SLC22A2O15244 555 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 STAMBPO95630 424 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 CKMT2P17540 419 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 DNAJB2P25686 324 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 POU4F1Q01851 419 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TMEM86AQ8N2M4 240 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 DIS3LQ8TF46 1054 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 ANKRD49Q8WVL7 239 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 MRGPRX2Q96LB1 330 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 CCT7Q99832 543 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 SLX1AQ9BQ83 275 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 IGSF5Q9NSI5 407 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 CACNA2D2Q9NY47 1150 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TRIP12Q14669 1992 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 H3BSA7 217 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 M0QZ92 97 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TIPRLO75663 272 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 LTA4HP09960 611 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 PIM1P11309 404 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 RPL26P61254 145 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 GPR158Q5T848 1215 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 C2CD4AQ8NCU7 369 aaPredicted RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 OR52K2Q8NGK3 314 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 MRPS26Q9BYN8 205 aaKnown RBP12.98□□□□□ -0.33
SHC1-210ENST00000448116 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 TRAF6Q9Y4K3 522 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 OTOFQ9HC10 1997 aa12.98□□□□□ -0.33
SHC1-210ENST00000448116 C7orf72A4D263 438 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 FBP2O00757 339 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 AKAP10O43572 662 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SNRPB2P08579 225 aaKnown RBP12.97□□□□□ -0.33
SHC1-210ENST00000448116 ZNF24P17028 368 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 ETFBP38117 255 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 GRIK1P39086 918 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SLC7A2P52569 658 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 METTL23Q86XA0 190 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 AHI1Q8N157 1196 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CASP10Q92851 521 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 ASB9Q96DX5 294 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CROTQ9UKG9 612 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 ARL5CA6NH57 179 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CCR1P32246 355 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CD86P42081 329 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 STX1BP61266 288 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 GRB14Q14449 540 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 TECRLQ5HYJ1 363 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SDHAF4Q5VUM1 108 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 PIM3Q86V86 326 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 LCA5Q86VQ0 697 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 GRIN3AQ8TCU5 1115 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 GTF3C2Q8WUA4 911 aaPredicted RBP12.97□□□□□ -0.33
SHC1-210ENST00000448116 SLC29A1Q99808 456 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 DSEQ9UL01 958 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 NR5A2O00482 541 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 AP1G1O43747 822 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SRP72O76094 671 aaKnown RBP12.97□□□□□ -0.33
SHC1-210ENST00000448116 GRIA3P42263 894 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CSRP3P50461 194 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 SQLEQ14534 574 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms