RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SLC9A4Q6AI14 798 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 GATAD2AQ86YP4 633 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 HDAC11Q96DB2 347 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 NT5MQ9NPB1 228 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 APOBEC2Q9Y235 224 aaKnown RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 HYOU1Q9Y4L1 999 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 COL5A1P20908 1838 aaPredicted RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 TTC24A2A3L6 582 aaPredicted RBP18.75■□□□□ 0.59
CCDC188-202ENST00000444532 APOL1O14791 398 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 TNFSF14O43557 240 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 PSTPIP1O43586 416 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 MAP3K6O95382 1288 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 TNNT1P13805 278 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 CCNB1P14635 433 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 NFKBIAP25963 317 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 LIG3P49916 1009 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 PFN3P60673 137 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 MAXP61244 160 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 FOXC1Q12948 553 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 C11orf63Q6NUN7 778 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 KANSL1Q7Z3B3 1105 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 SLC22A18ASQ8N1D0 253 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 PLD5Q8N7P1 536 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 CCNYQ8ND76 341 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 RNF25Q96BH1 459 aaPredicted RBP18.75■□□□□ 0.59
CCDC188-202ENST00000444532 BAG1Q99933 345 aaPredicted RBP18.75■□□□□ 0.59
CCDC188-202ENST00000444532 TFR2Q9UP52 801 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 WASF3Q9UPY6 502 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 PCDHGC4Q9Y5F7 938 aa18.75■□□□□ 0.59
CCDC188-202ENST00000444532 SPTY2D1-AS1A0A0U1RR47 76 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 BTNL10A8MVZ5 291 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 FTH1P19P0C7X4 201 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 C6P13671 934 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 YPEL5P62699 121 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 ITKQ08881 620 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 LRRC14Q15048 493 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 ALG1LQ6GMV1 187 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 RAD9BQ6WBX8 426 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 DPPA4Q7L190 304 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 TP53I13Q8NBR0 393 aaPredicted RBP18.74■□□□□ 0.59
CCDC188-202ENST00000444532 POLR1EQ9GZS1 481 aaKnown RBP18.74■□□□□ 0.59
CCDC188-202ENST00000444532 RBM22Q9NW64 420 aaKnown RBP eCLIP18.74■□□□□ 0.59
CCDC188-202ENST00000444532 PHTF1Q9UMS5 762 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
CCDC188-202ENST00000444532 HEY1Q9Y5J3 304 aa18.74■□□□□ 0.59
CCDC188-202ENST00000444532 LZTS3O60299 673 aaPredicted RBP18.73■□□□□ 0.59
CCDC188-202ENST00000444532 NEBLO76041 1014 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 PRKCGP05129 697 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 IGFALSP35858 605 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 PPIDQ08752 370 aaKnown RBP18.73■□□□□ 0.59
CCDC188-202ENST00000444532 TFDP2Q14188 446 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 PTK2BQ14289 1009 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 FZD2Q14332 565 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 PDK1Q15118 436 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 TAZQ16635 292 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 MFSD7Q6UXD7 560 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 LIPIQ6XZB0 460 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 RFX6Q8HWS3 928 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 CCDC13Q8IYE1 715 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 TPCN2Q8NHX9 752 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 PDCD6IPQ8WUM4 868 aaKnown RBP18.73■□□□□ 0.59
CCDC188-202ENST00000444532 SEMA3CQ99985 751 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 MBNL1Q9NR56 388 aaKnown RBP18.73■□□□□ 0.59
CCDC188-202ENST00000444532 FTSJ1Q9UET6 329 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 COQ6Q9Y2Z9 468 aa18.73■□□□□ 0.59
CCDC188-202ENST00000444532 RCCD1A6NED2 376 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 LDOC1O95751 146 aaPredicted RBP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 CPP00450 1065 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 ATXN1LP0C7T5 689 aaKnown RBP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 ELFN1P0C7U0 828 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 DGKAP23743 735 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 CDKN2BP42772 138 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 HNRNPKP61978 463 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 TRAF2Q12933 501 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 RALGDSQ12967 914 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 PDE1CQ14123 709 aaPredicted RBP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 WSCD2Q2TBF2 565 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 ARMC12Q5T9G4 340 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 RAB44Q7Z6P3 723 aaPredicted RBP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 DAAM2Q86T65 1068 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 SLCO6A1Q86UG4 719 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 PARGQ86W56 976 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 KATNAL2Q8IYT4 538 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 RCOR2Q8IZ40 523 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 EID2Q8N6I1 236 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 ADAMTS14Q8WXS8 1223 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 LGMNQ99538 433 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 BRD8Q9H0E9 1235 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 GOLPH3Q9H4A6 298 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 DNAJC28Q9NX36 388 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
CCDC188-202ENST00000444532 REXO2Q9Y3B8 237 aaKnown RBP18.72■□□□□ 0.59
CCDC188-202ENST00000444532 TDRD6O60522 2096 aaKnown RBP18.71■□□□□ 0.59
CCDC188-202ENST00000444532 GOLGA6L6A8MZA4 724 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 PJA2O43164 708 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 PIAS2O75928 621 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 DKK1O94907 266 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 ZRANB2O95218 330 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC188-202ENST00000444532 PGLSO95336 258 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms