RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 MTSS1O43312 755 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 HTRA2O43464 458 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 MMP20O60882 483 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 TJP3O95049 919 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 CER1O95813 267 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 ITIH2P19823 946 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 FAM193AP78312 1265 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 DSC2Q02487 901 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 TRAF2Q12933 501 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZBTB17Q13105 803 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 GSE1Q14687 1217 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 PRKD1Q15139 912 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 UAP1L1Q3KQV9 507 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 TMEM52BQ4KMG9 183 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 LAYNQ6UX15 382 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 NSMCE3Q96MG7 304 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 WRAP53Q9BUR4 548 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 C1QTNF2Q9BXJ5 285 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 PCDHB9Q9Y5E1 797 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 RAI2Q9Y5P3 530 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 DOCK9Q9BZ29 2069 aa17.58■□□□□ 0.4
SMARCAL1-209ENST00000444508 A0A1W2PR77 199 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 GOLGA6L9A6NEM1 432 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 HACD1B0YJ81 288 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 CDX4O14627 284 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 WNT9AO14904 365 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 MAGEC1O60732 1142 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 OPHN1O60890 802 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 TM7SF2O76062 418 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 PAK4O96013 591 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 PRKCGP05129 697 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 MMP12P39900 470 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 ID4P47928 161 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 BNC1Q01954 994 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 OVGP1Q12889 678 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZNF211Q13398 564 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 KIF19Q2TAC6 998 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 ARMC12Q5T9G4 340 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 IQCHQ86VS3 1027 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 MFSD2AQ8NA29 543 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 ARRDC2Q8TBH0 407 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 ASB12Q8WXK4 309 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 RMDN1Q96DB5 314 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 QKIQ96PU8 341 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 FERMT1Q9BQL6 677 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 RTKNQ9BST9 563 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 C1QTNF7Q9BXJ2 289 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 CEP41Q9BYV8 373 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 FZD3Q9NPG1 666 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 SNX11Q9Y5W9 270 aa17.57■□□□□ 0.4
SMARCAL1-209ENST00000444508 H7C0C1 242 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 TLR4O00206 839 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 PGLSO95336 258 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 WNT1P04628 370 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 ATP5OP48047 213 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 XRCC4Q13426 336 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 PUM1Q14671 1186 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 NOMO1Q15155 1222 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 RPS6KA1Q15418 735 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 HLA-BQ31612 363 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 AADACL2Q6P093 401 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 DPPA4Q7L190 304 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 NDUFAF2Q8N183 169 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 CNTD1Q8N815 330 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 TMEM145Q8NBT3 493 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 TRIM58Q8NG06 486 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 OR2I1PQ8NGU4 316 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 ACTL9Q8TC94 416 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 KLHDC7BQ96G42 594 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 PDLIM2Q96JY6 352 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 AGAP3Q96P47 875 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 HERPUD2Q9BSE4 406 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 GAREM1Q9H706 876 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 DLL3Q9NYJ7 618 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 PHTF1Q9UMS5 762 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 CA5BQ9Y2D0 317 aa17.56■□□□□ 0.4
SMARCAL1-209ENST00000444508 KNL1Q8NG31 2342 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 FPGTO14772 594 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 ELFN1P0C7U0 828 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 CYP2A6P11509 494 aaPredicted RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 PTPN3P26045 913 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 CD86P42081 329 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 CTSKP43235 329 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 LIG3P49916 1009 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 EPHB1P54762 984 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 OTUD4Q01804 1114 aaKnown RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 SEMG2Q02383 582 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 NIPAL4Q0D2K0 466 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 FGL2Q14314 439 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 TEX44Q53QW1 395 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 SEL1L2Q5TEA6 688 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 MEI1Q5TIA1 1274 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 CDKL3Q8IVW4 592 aaPredicted RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 TTC13Q8NBP0 860 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 DENND6BQ8NEG7 585 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 FAM174AQ8TBP5 190 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms