RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 WNT16Q9UBV4 365 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CNOT7Q9UIV1 285 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 TOP2AP11388 1531 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 INSRP06213 1382 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ARHGEF37A1IGU5 675 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MBD3L4A6NDZ8 208 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 MBD3L3A6NE82 208 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 ALOX15BO15296 676 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CHADO15335 359 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MEFVO15553 781 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 ZNF264O43296 627 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SORBS2O94875 1100 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 HEXIM1O94992 359 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 LGI1O95970 557 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KLRC1P26715 233 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MAP4P27816 1152 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 KCNJ1P48048 391 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CAPZA1P52907 286 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TSPAN5P62079 268 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TLE1Q04724 770 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CTBP1Q13363 440 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RAB3GAP1Q15042 981 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KHDC1Q4VXA5 237 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 GPAT3Q53EU6 434 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 HSP90AA4PQ58FG1 418 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SGO1Q5FBB7 561 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 DGAT2L7PQ6IED9 249 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 SLC15A3Q8IY34 581 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 FMR1NBQ8N0W7 255 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 SMARCC2Q8TAQ2 1214 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 UBA3Q8TBC4 463 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CKAP2Q8WWK9 683 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 FOXRED1Q96CU9 486 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 RASD2Q96D21 266 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SLC41A3Q96GZ6 507 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 LRFN5Q96NI6 719 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PANX2Q96RD6 677 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MED15Q96RN5 788 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RAD21L1Q9H4I0 556 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KCNK12Q9HB15 430 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CATSPERZQ9NTU4 200 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 GDE1Q9NZC3 331 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SENP1Q9P0U3 644 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 HCN3Q9P1Z3 774 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PEF1Q9UBV8 284 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 LIMA1Q9UHB6 759 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 NIP7Q9Y221 180 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-206ENST00000444475 TELO2Q9Y4R8 837 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PCDHB4Q9Y5E5 795 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PTCH1Q13635 1447 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 FAM47E-STBD1D6RA91 191 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 TSPAN4O14817 238 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 HAT1O14929 419 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ZNF185O15231 689 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 EIF3DO15371 548 aaKnown RBP eCLIP3.98□□□□□ -1.77
UBR3-206ENST00000444475 GUCY1B2O75343 617 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 CRTAPO75718 401 aaPredicted RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 MT-ATP6P00846 226 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PCCBP05166 539 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 YES1P07947 543 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 CLTAP09496 248 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 TUBG1P23258 451 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ATP5C1P36542 298 aaKnown RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 LMAN1P49257 510 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ANXA11P50995 505 aaKnown RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 ALDH18A1P54886 795 aaKnown RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 ST8SIA6P61647 398 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 VBP1P61758 197 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 CDC42EP1Q00587 391 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PLAURQ03405 335 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PTH1RQ03431 593 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 DRP2Q13474 957 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 NKG7Q16617 165 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ZNF829Q3KNS6 432 aaPredicted RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 KLHL26Q53HC5 615 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 THOC7Q6I9Y2 204 aaKnown RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 GPAT2Q6NUI2 795 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 TMEM88Q6PEY1 159 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 SARM1Q6SZW1 724 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 LEKR1Q6ZMV7 388 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 FAM114A1Q8IWE2 563 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 FAM20CQ8IXL6 584 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PM20D2Q8IYS1 436 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 FBXL20Q96IG2 436 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ZNF479Q96JC4 524 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PLIN2Q99541 437 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 NELFAQ9H3P2 528 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 TUBG2Q9NRH3 451 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 ZNF70Q9UC06 446 aaPredicted RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 ATP6V1HQ9UI12 483 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 CDH22Q9UJ99 828 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 CDC14AQ9UNH5 594 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 AP4E1Q9UPM8 1137 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 LRP5O75197 1615 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 PRAMEF27A3QJZ7 478 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 GCOM1H8Y6P7 765 aaPredicted RBP3.98□□□□□ -1.77
UBR3-206ENST00000444475 TK2O00142 265 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 KCNK3O14649 394 aa3.98□□□□□ -1.77
UBR3-206ENST00000444475 HGSO14964 777 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms