RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 FAM131BQ86XD5 332 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 SFTPA2Q8IWL1 248 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 HCAR2Q8TDS4 363 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 C18orf8Q96DM3 657 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 CFAP57Q96MR6 1250 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 SEMA6CQ9H3T2 930 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 SIX2Q9NPC8 291 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 TMEM248Q9NWD8 314 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 OR12D3Q9UGF7 316 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
HMGN1-208ENST00000443046 CTNND2Q9UQB3 1225 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 GTPBP10A4D1E9 387 aaKnown RBP14.52□□□□□ -0.09
HMGN1-208ENST00000443046 TNFP01375 233 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 CASRP41180 1078 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 MAPK10P53779 464 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 STX17P56962 302 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 KCNAB2Q13303 367 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 C14orf28Q4W4Y0 310 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 RAB6CQ53S08 254 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 INO80DQ53TQ3 878 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-208ENST00000443046 FAM102AQ5T9C2 384 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-208ENST00000443046 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 C17orf82Q86X59 251 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-208ENST00000443046 PTRH1Q86Y79 214 aaKnown RBP14.52□□□□□ -0.09
HMGN1-208ENST00000443046 IRF2BP1Q8IU81 584 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 FAM71AQ8IYT1 594 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 TMEM35BQ8NCS4 154 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 ATL2Q8NHH9 583 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 NKD1Q969G9 470 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 PDXPQ96GD0 296 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 WDR92Q96MX6 357 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 PSMG3-AS1Q96PY0 264 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 RAB6CQ9H0N0 254 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 LRIT1Q9P2V4 623 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 KLQ9UEF7 1012 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 DNAI1Q9UI46 699 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 COQ6Q9Y2Z9 468 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 OR1A2Q9Y585 309 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 PCDHGA3Q9Y5H0 932 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.09
HMGN1-208ENST00000443046 PRRC2CQ9Y520 2896 aaKnown RBP14.51□□□□□ -0.09
HMGN1-208ENST00000443046 TSPAN11A1L157 253 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 ZSCAN5CA6NGD5 496 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-208ENST00000443046 FAM72CH0Y354 149 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 STMND1H3BQB6 276 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 B4GAT1O43505 415 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 TMCC1O94876 653 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 CCL4P13236 92 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 ADRA1BP35368 520 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 POLE2P56282 527 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 RAD51Q06609 339 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 ELP6Q0PNE2 266 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 PAK1Q13153 545 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 SERINC3Q13530 473 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 IGFBP7Q16270 282 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 EXOC3L4Q17RC7 722 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 SKIDA1Q1XH10 827 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 EFHC2Q5JST6 749 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 FAM72AQ5TYM5 149 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 FAM72DQ6L9T8 149 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 DPY19L2P1Q6NXN4 242 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 ZNF438Q7Z4V0 828 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 FAM72BQ86X60 149 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 FAM46DQ8NEK8 389 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 CASKIN2Q8WXE0 1202 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 OR1E3Q8WZA6 343 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 MAGEB5Q9BZ81 275 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 CDH19Q9H159 772 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 NOL6Q9H6R4 1146 aaKnown RBP14.51□□□□□ -0.09
HMGN1-208ENST00000443046 HPCAL4Q9UM19 191 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 MAN2B2Q9Y2E5 1009 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 CENPEQ02224 2701 aa14.51□□□□□ -0.09
HMGN1-208ENST00000443046 TMEM202A6NGA9 273 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 AGRPO00253 132 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 HGSO14964 777 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 INSIG1O15503 277 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 CPNE6O95741 557 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 HOXC4P09017 264 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 PNMA6AP0CW24 399 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 FGF3P11487 239 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 KIAA1024LP59773 190 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 MTM1Q13496 603 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 NR1D2Q14995 579 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 CLPPQ16740 277 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 UGP2Q16851 508 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 PHF19Q5T6S3 580 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 TMEM164Q5U3C3 297 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 PLA2G15Q8NCC3 412 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 FUBP1Q96AE4 644 aaKnown RBP14.5□□□□□ -0.09
HMGN1-208ENST00000443046 HMCESQ96FZ2 354 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 FGF22Q9HCT0 170 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 PCDH12Q9NPG4 1184 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 ANAPC2Q9UJX6 822 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 DNAJC12Q9UKB3 198 aa14.5□□□□□ -0.09
HMGN1-208ENST00000443046 CRYBG3Q68DQ2 2970 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 TNFRSF10CO14798 259 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 BUB1O43683 1085 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms