RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 PCDH12Q9NPG4 1184 aa12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 PHTF1Q9UMS5 762 aa12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 EFR3BQ9Y2G0 817 aa12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 PCDHB9Q9Y5E1 797 aa12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 LRP4O75096 1905 aa12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 ARID1BQ8NFD5 2236 aaPredicted RBP12.64□□□□□ -0.39
CDCA4P3-201ENST00000442572 CCDC66A2RUB6 948 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SH3BP5O60239 455 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 CBFA2T3O75081 653 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 TGM2P21980 687 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 IFI35P80217 286 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 KIF5AQ12840 1032 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 PPP2R5EQ16537 467 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 MFSD7Q6UXD7 560 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SPOCD1Q6ZMY3 1216 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 DPPA4Q7L190 304 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SPATS2Q86XZ4 545 aaKnown RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 RFX6Q8HWS3 928 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SYCE1Q8N0S2 351 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 NDUFAF2Q8N183 169 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 BAHD1Q8TBE0 780 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SETD7Q8WTS6 366 aaKnown RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 KLK6Q92876 244 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 RNF25Q96BH1 459 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 CENPTQ96BT3 561 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 BMFQ96LC9 184 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 OLFM3Q96PB7 478 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 IL12RB2Q99665 862 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 NOD2Q9HC29 1040 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 RBM22Q9NW64 420 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 REXO2Q9Y3B8 237 aaKnown RBP12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 PPIL1Q9Y3C6 166 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 PCDHA3Q9Y5H8 950 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 SPTBN2O15020 2390 aa12.63□□□□□ -0.39
CDCA4P3-201ENST00000442572 MED19A0JLT2 244 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PSMD11O00231 422 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 MTSS1O43312 755 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 MMP20O60882 483 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 TRIM16O95361 564 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 CPP00450 1065 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 CYP2A6P11509 494 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 EPHA8P29322 1005 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 CTNNA1P35221 906 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PTPN7P35236 360 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 CETN2P41208 172 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PEX5P50542 639 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 NAP1L1P55209 391 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PFN3P60673 137 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PTK2BQ14289 1009 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 SLC14A2Q15849 920 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 ARMC12Q5T9G4 340 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 Q6ZSR6 202 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PTAR1Q7Z6K3 402 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 RAVER1Q8IY67 606 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 OR13H1Q8NG92 308 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 RHBDD1Q8TEB9 315 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 SAP25Q8TEE9 199 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 SCRN2Q96FV2 425 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 LACRTQ9GZZ8 138 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 GGT7Q9UJ14 662 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PCDHGC4Q9Y5F7 938 aa12.62□□□□□ -0.39
CDCA4P3-201ENST00000442572 PTPRBP23467 1997 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 POM121BA6NF01 834 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 MIF4GDA9UHW6 222 aaKnown RBP12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 ARHGAP6O43182 974 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 CST8O60676 142 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 PGLSO95336 258 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 MAP3K6O95382 1288 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 ITGAVP06756 1048 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 ELFN1P0C7U0 828 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 C6P13671 934 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 TNNT1P13805 278 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 CTNNA2P26232 953 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 PMLP29590 882 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 LIG3P49916 1009 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 MAXP61244 160 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 SHC2P98077 582 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 ITKQ08881 620 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 LRRC14Q15048 493 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 SHBQ15464 509 aa12.61□□□□□ -0.39
CDCA4P3-201ENST00000442572 LRRC73Q5JTD7 316 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms