RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ARCQ7LC44 396 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 JAZF1Q86VZ6 243 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 OR7G3Q8NG95 312 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC9A7Q96T83 725 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 KCNS3Q9BQ31 491 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF696Q9H7X3 374 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CYP3A43Q9HB55 503 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 POTEMA6NI47 508 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 VSTM5A8MXK1 200 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 M0R036 132 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 PLOD2O00469 737 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 FADS1O60427 444 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ADAP00813 363 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CYP17A1P05093 508 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CYP11B1P15538 503 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 XRCC1P18887 633 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CRATP43155 626 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ARL4CP56559 192 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC25A3Q00325 362 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 AP5B1Q2VPB7 878 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 COL13A1Q5TAT6 717 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ARHGAP40Q5TG30 622 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 POTEGQ6S5H5 508 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 C5orf46Q6UWT4 87 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 KRT25Q7Z3Z0 450 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ZC3H7AQ8IWR0 971 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 THNSL1Q8IYQ7 743 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SEMA6DQ8NFY4 1073 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 OR6Q1Q8NGQ2 317 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 APOPT1Q96IL0 206 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 C9orf72Q96LT7 481 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 RC3H2Q9HBD1 1191 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 HCN3Q9P1Z3 774 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TJP2Q9UDY2 1190 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 LOC102724428A0A0B4J2F2 783 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 PRAMEF33A0A0G2JMD5 474 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ADAM10O14672 748 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TERTO14746 1132 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC7A4O43246 635 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 NARSO43776 548 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 PRAMEF10O60809 474 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 DNAJA2O60884 412 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 MITFO75030 526 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 EFCAB14O75071 495 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SYN1P17600 705 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC5A2P31639 672 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SHMT1P34896 483 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 HOXA1P49639 335 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SIK1P57059 783 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 VLDLRP98155 873 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CHRNDQ07001 517 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC13A2Q13183 592 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SLC12A1Q13621 1099 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TRIP4Q15650 581 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF362Q5T0B9 420 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 AGAP6Q5VW22 663 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 MLIPQ5VWP3 458 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ANKRD22Q5VYY1 191 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TTC23Q5W5X9 447 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 LRRC8DQ7L1W4 858 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ADGRG6Q86SQ4 1221 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 TPRA1Q86W33 373 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CACUL1Q86Y37 369 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 IFNL2Q8IZJ0 200 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 CADM3Q8N126 398 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ZSCAN1Q8NBB4 408 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 DAGLBQ8NCG7 672 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 NAXEQ8NCW5 288 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 OR1M1Q8NGA1 313 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 OR4Q3Q8NH05 313 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 FBXO25Q8TCJ0 367 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SNX33Q8WV41 574 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 PTERQ96BW5 349 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 AGAP4Q96P64 663 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 RBBP8Q99708 897 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 BTBD1Q9H0C5 482 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 SEMA4AQ9H3S1 761 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 DDX31Q9H8H2 851 aaKnown RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 C14orf105Q9NVL8 296 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF230Q9UIE0 474 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-209ENST00000442510 NUDT5Q9UKK9 219 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 STAP1Q9ULZ2 295 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 PTCH2Q9Y6C5 1203 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 JCADQ9P266 1359 aa5.62□□□□□ -1.51
PTPRC-209ENST00000442510 POM121BA6NF01 834 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF701M0R085 212 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 THRBP10828 461 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FASTKD3Q14CZ7 662 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SNAPC1Q16533 368 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CERKLQ49MI3 558 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 COLEC12Q5KU26 742 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RNF219Q5W0B1 726 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms