RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 EXOC2Q96KP1 924 aa12.92□□□□□ -0.34
TRIM13-205ENST00000442421 SEMA3CQ99985 751 aa12.92□□□□□ -0.34
TRIM13-205ENST00000442421 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
TRIM13-205ENST00000442421 KLC2Q9H0B6 622 aa12.92□□□□□ -0.34
TRIM13-205ENST00000442421 RNF215Q9Y6U7 377 aa12.92□□□□□ -0.34
TRIM13-205ENST00000442421 C9orf172C9J069 976 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PPFIA2O75334 1257 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 LRIG2O94898 1065 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PIGNO95427 931 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 IGSF6O95976 241 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PCCBP05166 539 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 SFTPCP11686 197 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-205ENST00000442421 RHOAP61586 193 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-205ENST00000442421 TLE1Q04724 770 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 RAD51Q06609 339 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 ZFP36L1Q07352 338 aaKnown RBP12.91□□□□□ -0.34
TRIM13-205ENST00000442421 ELP6Q0PNE2 266 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 CERCAMQ5T4B2 595 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PHF19Q5T6S3 580 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 ZNF574Q6ZN55 896 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PHLDB2Q86SQ0 1253 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 DTX1Q86Y01 620 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-205ENST00000442421 TBC1D31Q96DN5 1066 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 WDR92Q96MX6 357 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 RBM15Q96T37 977 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■■□ 20.5
TRIM13-205ENST00000442421 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 DKK3Q9UBP4 350 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 APPL1Q9UKG1 709 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 PCDHB11Q9Y5F2 797 aa12.91□□□□□ -0.34
TRIM13-205ENST00000442421 B4DGG1 531 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 LSM8O95777 96 aaKnown RBP12.9□□□□□ -0.34
TRIM13-205ENST00000442421 TNFP01375 233 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 MMEP08473 750 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 GLB1P16278 677 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 NOMO3P69849 1222 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 C16orf72Q14CZ0 275 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 NAA35Q5VZE5 725 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 DPY19L2P1Q6NXN4 242 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 NOP9Q86U38 636 aaKnown RBP12.9□□□□□ -0.34
TRIM13-205ENST00000442421 SLITRK4Q8IW52 837 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 FAM46DQ8NEK8 389 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 GPT2Q8TD30 523 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 OR1E3Q8WZA6 343 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 TMEM159Q96B96 161 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 NOL6Q9H6R4 1146 aaKnown RBP12.9□□□□□ -0.34
TRIM13-205ENST00000442421 RDH14Q9HBH5 336 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 PCDH12Q9NPG4 1184 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 MRPL40Q9NQ50 206 aaKnown RBP12.9□□□□□ -0.34
TRIM13-205ENST00000442421 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 LHX3Q9UBR4 397 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 MFHAS1Q9Y4C4 1052 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
TRIM13-205ENST00000442421 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
TRIM13-205ENST00000442421 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 TMEM202A6NGA9 273 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-205ENST00000442421 PRKCGP05129 697 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-205ENST00000442421 SDC4P31431 198 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 LIG3P49916 1009 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 ARHGEF7Q14155 803 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 HLTFQ14527 1009 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM13-205ENST00000442421 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 ARCQ7LC44 396 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 PTRH1Q86Y79 214 aaKnown RBP12.89□□□□□ -0.35
TRIM13-205ENST00000442421 LURAP1LQ8IV03 231 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 ATL2Q8NHH9 583 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 CCL4L1Q8NHW4 92 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 JOSD2Q8TAC2 188 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 HMCESQ96FZ2 354 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 TMEM168Q9H0V1 697 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 DPEP2Q9H4A9 486 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 RETREG1Q9H6L5 497 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
TRIM13-205ENST00000442421 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 DGKBQ9Y6T7 804 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 TEX15Q9BXT5 2789 aa12.89□□□□□ -0.35
TRIM13-205ENST00000442421 TSPAN11A1L157 253 aa12.88□□□□□ -0.35
TRIM13-205ENST00000442421 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-205ENST00000442421 CCL4P13236 92 aa12.88□□□□□ -0.35
TRIM13-205ENST00000442421 PNLIPP16233 465 aa12.88□□□□□ -0.35
TRIM13-205ENST00000442421 MMP12P39900 470 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms