RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZNF839A8K0R7 811 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 HACD1B0YJ81 288 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 F5H423 210 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 AQP9O43315 295 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 GPR32O75388 356 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 C7P10643 843 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 CYP2C9P11712 490 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 ZNF182P17025 639 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 S100A1P23297 94 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 JAK1P23458 1154 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 HOXD10P28358 340 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 HOXA11P31270 313 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 NAGLUP54802 743 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 TRIM16LQ309B1 348 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 BSPRYQ5W0U4 402 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 ABRAXAS1Q6UWZ7 409 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 PELI3Q8N2H9 469 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 OR2T34Q8NGX1 318 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 OR2T3Q8NH03 318 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 CANT1Q8WVQ1 401 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SOCS4Q8WXH5 440 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 HPDLQ96IR7 371 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 CGREF1Q99674 301 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 CAB39LQ9H9S4 337 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 ACSS2Q9NR19 701 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TMEM181Q9P2C4 612 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 HESX1Q9UBX0 185 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 ANKRD6Q9Y2G4 727 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TCAF1Q9Y4C2 921 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TANC1Q9C0D5 1861 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SDHDO14521 159 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TIMM44O43615 452 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SEC24DO94855 1032 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 SBK3P0C264 359 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 MAP4P27816 1152 aaKnown RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 GNL1P36915 607 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 NDST1P52848 882 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SLC6A3Q01959 620 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 OXA1LQ15070 435 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 DPYSL2Q16555 572 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SLC10A6Q3KNW5 377 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 REP15Q6BDI9 236 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 FRA10AC1Q70Z53 315 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 IGFN1Q86VF2 1251 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 ZC3H7AQ8IWR0 971 aaKnown RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 KDM1BQ8NB78 822 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TAMM41Q96BW9 452 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 EFHD2Q96C19 240 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 CCDC97Q96F63 343 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 AP5M1Q9H0R1 490 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 CCM2LQ9NUG4 571 aaPredicted RBP11.98□□□□□ -0.49
LTBR-203ENST00000441074 DTLQ9NZJ0 730 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TK2O00142 265 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CLOCKO15516 846 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CLPXO76031 633 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 DDHD2O94830 711 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 BCL10O95999 233 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CYP3A5P20815 502 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 AKAP5P24588 427 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CSE1LP55060 971 aaKnown RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 MPP1Q00013 466 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 POU5F1BQ06416 359 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 GOLGA7BQ2TAP0 167 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 LRRC8EQ6NSJ5 796 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 GALNT18Q6P9A2 607 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 NT5DC4Q86YG4 428 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 EPHX4Q8IUS5 362 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
LTBR-203ENST00000441074 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 PNPT1Q8TCS8 783 aaKnown RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 SEPT8Q92599 483 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 ZUFSPQ96AP4 578 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 PSD2Q9BQI7 771 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 C9orf16Q9BUW7 83 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 MROQ9BYG7 248 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 LRRC40Q9H9A6 602 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 C1orf232A0A0U1RR37 186 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CPNE6O95741 557 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 GNRH1P01148 92 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 EIF2S1P05198 315 aaKnown RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 PFKMP08237 780 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 HADHAP40939 763 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 PTPN9P43378 593 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 PSEN2P49810 448 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CSRP3P50461 194 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 RBP5P82980 135 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 PURAQ00577 322 aaKnown RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 GNA12Q03113 381 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CD300CQ08708 224 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 NME3Q13232 169 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms