RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 SP110Q9HB58 689 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
COPS3-203ENST00000439936 SERGEFQ9UGK8 458 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 IL36AQ9UHA7 158 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 EVLQ9UI08 416 aaPredicted RBP7.57□□□□□ -1.2
COPS3-203ENST00000439936 RAB23Q9ULC3 237 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 PACSIN2Q9UNF0 486 aaPredicted RBP7.57□□□□□ -1.2
COPS3-203ENST00000439936 HEY1Q9Y5J3 304 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 KCNMB2Q9Y691 235 aa7.57□□□□□ -1.2
COPS3-203ENST00000439936 VPS13AQ96RL7 3174 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 hCG_1818297A0A087WSY0 165 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 PRR23AA6NEV1 266 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 MIF4GDA9UHW6 222 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 C1QTNF3-AMACRE9PGA6 284 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 KPNA3O00505 521 aaPredicted RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 KRIT1O00522 736 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 APOL1O14791 398 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 MUSKO15146 869 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 RNASEH2AO75792 299 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 PYGMP11217 842 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 RGRP47804 291 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CSNK1DP48730 415 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 DHPSP49366 369 aaPredicted RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 RENBPP51606 427 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 DYNLT1P63172 113 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 RAD51Q06609 339 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 ZNF33AQ06730 810 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CNTN1Q12860 1018 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 HNRNPDQ14103 355 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 RFTN1Q14699 578 aaPredicted RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 ELF2Q15723 593 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 POM121L1PQ3SYA9 428 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 TTC31Q49AM3 519 aaPredicted RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 FAM182AQ5T1J6 154 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 TMCO4Q5TGY1 634 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 MARC1Q5VT66 337 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 LAIR1Q6GTX8 287 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 ALKBH2Q6NS38 261 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 B4GALNT4Q76KP1 1039 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 LPCAT2Q7L5N7 544 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 SRLQ86TD4 932 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 C11orf74Q86VG3 221 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 SLC41A1Q8IVJ1 513 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CCDC50Q8IVM0 306 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 RGL4Q8IZJ4 473 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 PGBD5Q8N414 524 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 ATPAF2Q8N5M1 289 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 TEX26Q8N6G2 289 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CCNYQ8ND76 341 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 OR6K2Q8NGY2 324 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 MAML1Q92585 1016 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 RBM41Q96IZ5 413 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 LOXL4Q96JB6 756 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 NSMCE3Q96MG7 304 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 GDAP1L1Q96MZ0 367 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 PSKH2Q96QS6 385 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 LGMNQ99538 433 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 MDFIQ99750 246 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 HERPUD2Q9BSE4 406 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 CPEB1Q9BZB8 566 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 BTBD1Q9H0C5 482 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 ZDHHC6Q9H6R6 413 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
COPS3-203ENST00000439936 EFR3BQ9Y2G0 817 aa7.56□□□□□ -1.2
COPS3-203ENST00000439936 TRPM6Q9BX84 2022 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3DA0A087WVF3 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3IA0A087WXS9 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3EA0A087X179 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3KA0A087X1G2 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 BCLAF3A2AJT9 711 aaKnown RBP7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3FA6NER0 549 aaPredicted RBP7.55□□□□□ -1.2
COPS3-203ENST00000439936 FAM47DPA6NHR8 397 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 METTL12A8MUP2 240 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3LB9A6J9 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 IGSF6O95976 241 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 JCHAINP01591 159 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 RETP07949 1114 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3HP0C7X1 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 CCNB1P14635 433 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 MAOBP27338 520 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 ADH6P28332 368 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 CETN2P41208 172 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 PTGER3P43115 390 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 NR2C2P49116 596 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 SCNN1BP51168 640 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TAS2R38P59533 333 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 PPIDQ08752 370 aaKnown RBP7.55□□□□□ -1.2
COPS3-203ENST00000439936 PDK1Q15118 436 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 ZNF805Q5CZA5 627 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3GQ6DHY5 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TBC1D3CQ6IPX1 549 aa7.55□□□□□ -1.2
COPS3-203ENST00000439936 TIGD7Q6NT04 549 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms