RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 SGSM3Q96HU1 749 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 TRIB3Q96RU7 358 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 P2RY13Q9BPV8 354 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 PLCD4Q9BRC7 762 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 ZDHHC6Q9H6R6 413 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 PLAC1Q9HBJ0 212 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 SLC40A1Q9NP59 571 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 VPS45Q9NRW7 570 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 CACNA2D2Q9NY47 1150 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 MAD1L1Q9Y6D9 718 aa10.09□□□□□ -0.79
CBX5-202ENST00000439541 A0A0U1RQS6 177 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.08□□□□□ -0.8
CBX5-202ENST00000439541 LOC730098B7Z3J9 87 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 SMAPO00193 183 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 PIAS1O75925 651 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 PRLP01236 227 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 APODP05090 189 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
CBX5-202ENST00000439541 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
CBX5-202ENST00000439541 IL12RB1P42701 662 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 WASP42768 502 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 GALK1P51570 392 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 GPX6P59796 221 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 CDK18Q07002 472 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 CDH17Q12864 832 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 EIF4HQ15056 248 aaKnown RBP10.08□□□□□ -0.8
CBX5-202ENST00000439541 SLC1A5Q15758 541 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 POM121L1PQ3SYA9 428 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 CASC4Q6P4E1 433 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 CES3Q6UWW8 571 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 RANBP10Q6VN20 620 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 ZSWIM9Q86XI8 627 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 PCDH20Q8N6Y1 951 aaKnown RBP10.08□□□□□ -0.8
CBX5-202ENST00000439541 IFT43Q96FT9 208 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 FEM1CQ96JP0 617 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 SIGLEC10Q96LC7 697 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 FOXP3Q9BZS1 431 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 CEP44Q9C0F1 390 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 TEX264Q9Y6I9 313 aa10.08□□□□□ -0.8
CBX5-202ENST00000439541 SHISA7A6NL88 538 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 GSRP00390 522 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 EGFP01133 1207 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SLC4A1P02730 911 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ASLP04424 464 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SRPRAP08240 638 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 MLNP12872 115 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 CD72P21854 359 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SSTR1P30872 391 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SLC8A1P32418 973 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 GRIA2P42262 883 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 METAP1P53582 386 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ST8SIA6P61647 398 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 AP1S1P61966 158 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SNRPD1P62314 119 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 SARNPP82979 210 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 ZP2Q05996 745 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 NSUN2Q08J23 767 aaKnown RBP eCLIP10.07□□□□□ -0.8
CBX5-202ENST00000439541 SEPT6Q14141 434 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 EFTUD2Q15029 972 aaKnown RBP eCLIP10.07□□□□□ -0.8
CBX5-202ENST00000439541 CARD16Q5EG05 197 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 LRRC73Q5JTD7 316 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 FSTL4Q6MZW2 842 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 CYB5D1Q6P9G0 228 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 UNC5BQ8IZJ1 945 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 GBP7Q8N8V2 638 aaPredicted RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 MDM1Q8TC05 714 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PYROXD1Q8WU10 500 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ZNF778Q96MU6 729 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PPP1R2P1Q96PQ5 205 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 VPS37BQ9H9H4 285 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PCDHB9Q9Y5E1 797 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ANKRD36A6QL64 1941 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 BPTFQ12830 3046 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 LOC285095A0A1B0GVY8 99 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 K7EQS6 105 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ALOX15BO15296 676 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 PSMD3O43242 534 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 TCEA3O75764 348 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 TTC4O95801 387 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 UGT2B4P06133 528 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 CTSLP07711 333 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 SEMG2Q02383 582 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 TDGQ13569 410 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 MYLK3Q32MK0 819 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 UNC5AQ6ZN44 842 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 LINC00523Q86TU6 105 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 METTL3Q86U44 580 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 RELL1Q8IUW5 271 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 DNASE1L2Q92874 299 aa10.07□□□□□ -0.8
CBX5-202ENST00000439541 ISG20Q96AZ6 181 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 EBNA1BP2Q99848 306 aaKnown RBP10.07□□□□□ -0.8
CBX5-202ENST00000439541 FRMD8Q9BZ67 464 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms