RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FAM228BP0C875 321 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 PEX5P50542 639 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 SMTNL2Q2TAL5 461 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 COL28A1Q2UY09 1125 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 CFAP58Q5T655 872 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 TXNRD3NBQ6F5E7 133 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 PHACTR4Q8IZ21 702 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 TEKT4Q8WW24 435 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 ZNF599Q96NL3 588 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 CSPG4P5Q96PW8 444 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 ETNK2Q9NVF9 386 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 NCKIPSDQ9NZQ3 722 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 SPASTQ9UBP0 616 aa20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 APOBEC3BQ9UH17 382 aaKnown RBP20.46■□□□□ 0.87
NCKIPSD-206ENST00000439518 ATRXP46100 2492 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 LRRK1Q38SD2 2015 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 CFAP69A5D8W1 941 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 LMO7DNF2Z398 122 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 PEX11BO96011 259 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 PRKCGP05129 697 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 CYP1A2P05177 515 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 RARAP10276 462 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 AMPD1P23109 780 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 ARL4AP40617 200 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 SEMG2Q02383 582 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 BCL2L1Q07817 233 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 SLC10A7Q0GE19 358 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 DEFB133Q30KQ1 61 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 PRRT3Q5FWE3 981 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 TMCO4Q5TGY1 634 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 HNRNPLLQ8WVV9 542 aaKnown RBP20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 HSPH1Q92598 858 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 LRRC61Q9BV99 259 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 EVA1BQ9NVM1 165 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 SEPT3Q9UH03 358 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 LUC7L2Q9Y383 392 aaKnown RBP20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 AK5Q9Y6K8 562 aa20.45■□□□□ 0.86
NCKIPSD-206ENST00000439518 TMEM110-MUSTN1A8MSY1 372 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 GOLGA6L19H0YKK7 550 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 TRAFD1O14545 582 aaPredicted RBP20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 GYPCP04921 128 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 RENBPP51606 427 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 AP1S1P61966 158 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 RALGDSQ12967 914 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 INPP5AQ14642 412 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 LBRQ14739 615 aaKnown RBP20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 FAXCQ5TGI0 409 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 TMCO3Q6UWJ1 677 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 IFI44Q8TCB0 444 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 SPOCK2Q92563 424 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 BTBD6Q96KE9 485 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 IL12RB2Q99665 862 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 NUP85Q9BW27 656 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 BOCQ9BWV1 1114 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 SLC13A1Q9BZW2 595 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 CLPBQ9H078 707 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 PCDH18Q9HCL0 1135 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 IFNKQ9P0W0 207 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 IP6K2Q9UHH9 426 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 ANAPC7Q9UJX3 599 aa20.44■□□□□ 0.86
NCKIPSD-206ENST00000439518 MAFKO60675 156 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 TSHRP16473 764 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 SCNN1BP51168 640 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 ADKP55263 362 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 POLR2LP62875 67 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 SLC25A11Q02978 314 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 PPARDQ03181 441 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 C1orf61Q13536 156 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 CDKN3Q16667 212 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 GUSBP11Q6P575 273 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 ALKBH5Q6P6C2 394 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 APOOQ9BUR5 198 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 NENFQ9UMX5 172 aa20.43■□□□□ 0.86
NCKIPSD-206ENST00000439518 EME2A4GXA9 379 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 TLX3O43711 291 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 LZTS3O60299 673 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 CR2P20023 1033 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 HK3P52790 923 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 MTM1Q13496 603 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 NFATC4Q14934 902 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 ALG11Q2TAA5 492 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 LIPIQ6XZB0 460 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 DPPA4Q7L190 304 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 PDZD3Q86UT5 571 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 SLC35F3Q8IY50 421 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 ABCG4Q9H172 646 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 OR1A2Q9Y585 309 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 PCDHB1Q9Y5F3 818 aa20.42■□□□□ 0.86
NCKIPSD-206ENST00000439518 ANKRD36A6QL64 1941 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 CPED1A4D0V7 1026 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 YY2O15391 372 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 HTRA2O43464 458 aaPredicted RBP20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 BRINP1O60477 761 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 RECQL5O94762 991 aaPredicted RBP20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 ANXA6P08133 673 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 IL4RP24394 825 aa20.41■□□□□ 0.86
NCKIPSD-206ENST00000439518 HNRNPH3P31942 346 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms