RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZBTB17Q13105 803 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 GRM3Q14832 879 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 CMPK2Q5EBM0 449 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 TMEM53Q6P2H8 277 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 UNC93AQ86WB7 457 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SMYD1Q8NB12 490 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 MYLPFQ96A32 169 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 NXNL1Q96CM4 212 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 BBS2Q9BXC9 721 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 UPF3AQ9H1J1 476 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 MTF2Q9Y483 593 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 COPG1Q9Y678 874 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 U3KQV3 271 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 COL11A1P12107 1806 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 RBM47A0AV96 593 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 DYTNA2CJ06 578 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 MRASO14807 208 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 GCATO75600 419 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTPN3P26045 913 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 OR1G1P47890 313 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 NR2C2P49116 596 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 PCYT1AP49585 367 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 RAD23AP54725 363 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 FSCN1Q16658 493 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 DDR2Q16832 855 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 SH2D5Q6ZV89 423 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZNF534Q76KX8 674 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 BTLAQ7Z6A9 289 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CENPSQ8N2Z9 138 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CAPSLQ8WWF8 208 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 PARK7Q99497 189 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 COLEC11Q9BWP8 271 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 NT5MQ9NPB1 228 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CRTAC1Q9NQ79 661 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 DCDC2Q9UHG0 476 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CRYL1Q9Y2S2 319 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 PHIPQ8WWQ0 1821 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 XYLBO75191 536 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CAPN15O75808 1086 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 H6PDO95479 791 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ELK4P28324 431 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 RPL14P50914 215 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 VPS26BQ4G0F5 336 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CCDC92Q53HC0 331 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 OGFRL1Q5TC84 451 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZNF470Q6ECI4 717 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ESRP1Q6NXG1 681 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 CIR1Q86X95 450 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 PSTKQ8IV42 348 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 RBM12BQ8IXT5 1001 aaKnown RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRRC52Q8N7C0 313 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 NUDT8Q8WV74 236 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 SDCCAG3Q96C92 435 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ISOC1Q96CN7 298 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 VPS39Q96JC1 886 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 HSFY1Q96LI6 401 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 ADAMTS10Q9H324 1103 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 RRAGCQ9HB90 399 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 NDUFA13Q9P0J0 144 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-202ENST00000439374 SLC2A6Q9UGQ3 507 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 USP22Q9UPT9 525 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 KCNH4Q9UQ05 1017 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 MYO7AQ13402 2215 aa10□□□□□ -0.81
CDC42SE1-202ENST00000439374 MYADML2A6NDP7 307 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TADA2AO75478 443 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TBX18O95935 607 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FUCA1P04066 466 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CCDC166P0CW27 439 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 IKBKEQ14164 716 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 C1QTNF12Q5T7M4 302 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 IQSEC1Q6DN90 963 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLEC4FQ8N1N0 589 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 ITCHQ96J02 903 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CYP2S1Q96SQ9 504 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 POMKQ9H5K3 350 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 STN1Q9H668 368 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 SSU72Q9NP77 194 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 SARS2Q9NP81 518 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FLRT1Q9NZU1 646 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 C6orf203Q9P0P8 240 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 OAZ3Q9UMX2 235 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TTC3P53804 2025 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 UBA6A0AVT1 1052 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PRORSD1PA6NEY8 169 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 EI24O14681 340 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 HDAC3O15379 428 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 BNIP3LO60238 219 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 GPR32O75388 356 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 GSTT2P0CG29 244 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 GSTT2BP0CG30 244 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CDH3P22223 829 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 GGT5P36269 586 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTPN9P43378 593 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms