RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 SIX2Q9NPC8 291 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 TMEM248Q9NWD8 314 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 SIRPGQ9P1W8 387 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 NEU3Q9UQ49 428 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 PCDHB11Q9Y5F2 797 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 PCDHGA3Q9Y5H0 932 aa7.97□□□□□ -1.13
LINC00578-201ENST00000439009 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.13
LINC00578-201ENST00000439009 ZSCAN5CA6NGD5 496 aaPredicted RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 TNFRSF10CO14798 259 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 HGSO14964 777 aaPredicted RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 FGFR1OPO95684 399 aaKnown RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 TNFP01375 233 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ITIH2P19823 946 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 CR2P20023 1033 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 BPIFB4P59827 614 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 CYP4F2P78329 520 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 RAD51Q06609 339 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ELP6Q0PNE2 266 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 MTM1Q13496 603 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 SQSTM1Q13501 440 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 INPP5AQ14642 412 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 NR1D2Q14995 579 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 EXOC3L4Q17RC7 722 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ATXN7L2Q5T6C5 722 aaPredicted RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 KCTD16Q68DU8 428 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ISM2Q6H9L7 571 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 KLHL10Q6JEL2 608 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 DPY19L2P1Q6NXN4 242 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 BORAQ6PGQ7 559 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ENPP7Q6UWV6 458 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 NYAP1Q6ZVC0 841 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 ZNF438Q7Z4V0 828 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 RYBPQ8N488 228 aaPredicted RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 TMEM35BQ8NCS4 154 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 NKD1Q969G9 470 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 GDAP1L1Q96MZ0 367 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 CDH19Q9H159 772 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 NOL6Q9H6R4 1146 aaKnown RBP7.96□□□□□ -1.14
LINC00578-201ENST00000439009 SYNDIG1Q9H7V2 258 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 OR12D3Q9UGF7 316 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 HPCAL4Q9UM19 191 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 RNF215Q9Y6U7 377 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 RELNP78509 3460 aa7.96□□□□□ -1.14
LINC00578-201ENST00000439009 FAM72CH0Y354 149 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 STMND1H3BQB6 276 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 B4GAT1O43505 415 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 RAMP2O60895 175 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 TMCC1O94876 653 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 LRIG2O94898 1065 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 LSM8O95777 96 aaKnown RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 TRIM23P36406 574 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 CASRP41180 1078 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 ARSDP51689 593 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 STX17P56962 302 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 KIAA1024LP59773 190 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 PAK1Q13153 545 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 KCNAB2Q13303 367 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 UGP2Q16851 508 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 C14orf28Q4W4Y0 310 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 EFHC2Q5JST6 749 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 FAM72AQ5TYM5 149 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 FAM72DQ6L9T8 149 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 RD3Q7Z3Z2 195 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 FAM72BQ86X60 149 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 FAM131BQ86XD5 332 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 IRF2BP1Q8IU81 584 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 Q8N9G6 341 aaPredicted RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 GPBAR1Q8TDU6 330 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 OR1E3Q8WZA6 343 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 CENPIQ92674 756 aaPredicted RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 HMCESQ96FZ2 354 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 CFAP57Q96MR6 1250 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 WDR92Q96MX6 357 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 TAAR9Q96RI9 348 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 WRAP53Q9BUR4 548 aaKnown RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 NUP62CLQ9H1M0 184 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 EPN3Q9H201 632 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 SEMA6CQ9H3T2 930 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 PLCB1Q9NQ66 1216 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 LRIT1Q9P2V4 623 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 KLQ9UEF7 1012 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 ANAPC2Q9UJX6 822 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 DNAJC12Q9UKB3 198 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 AJAP1Q9UKB5 411 aaPredicted RBP7.95□□□□□ -1.14
LINC00578-201ENST00000439009 CTNND2Q9UQB3 1225 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 OR1A2Q9Y585 309 aa7.95□□□□□ -1.14
LINC00578-201ENST00000439009 CAPN5O15484 640 aaPredicted RBP7.94□□□□□ -1.14
LINC00578-201ENST00000439009 BUB1O43683 1085 aa7.94□□□□□ -1.14
LINC00578-201ENST00000439009 CPNE6O95741 557 aa7.94□□□□□ -1.14
LINC00578-201ENST00000439009 IGSF6O95976 241 aa7.94□□□□□ -1.14
LINC00578-201ENST00000439009 FGF3P11487 239 aaPredicted RBP7.94□□□□□ -1.14
LINC00578-201ENST00000439009 CCL4P13236 92 aa7.94□□□□□ -1.14
LINC00578-201ENST00000439009 CYP11B1P15538 503 aa7.94□□□□□ -1.14
LINC00578-201ENST00000439009 MSNP26038 577 aaKnown RBP7.94□□□□□ -1.14
LINC00578-201ENST00000439009 MMP12P39900 470 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms