RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 HGFP14210 728 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 ATP5F1P24539 256 aaPredicted RBP6.2□□□□□ -1.42
BDNF-210ENST00000438929 IL12AP29459 219 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 ECT2LQ008S8 904 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 PIGFQ07326 219 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 NAB1Q13506 487 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 RAB6CQ53S08 254 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 NAPRTQ6XQN6 538 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 FKBP9P1Q75LS8 142 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 ARMCX2Q7L311 632 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 CUZD1Q86UP6 607 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 RAVER1Q8IY67 606 aaKnown RBP6.2□□□□□ -1.42
BDNF-210ENST00000438929 PYROXD2Q8N2H3 581 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 SUN5Q8TC36 379 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 PROX1Q92786 737 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 CCDC126Q96EE4 140 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 DMRTB1Q96MA1 342 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 SORT1Q99523 831 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 ZNF670Q9BS34 389 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 RAB6CQ9H0N0 254 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 RIBC2Q9H4K1 309 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 EPS8L2Q9H6S3 715 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 MTRRQ9UBK8 725 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 FAM32AQ9Y421 112 aaKnown RBP6.2□□□□□ -1.42
BDNF-210ENST00000438929 SNX8Q9Y5X2 465 aa6.2□□□□□ -1.42
BDNF-210ENST00000438929 ECM29Q5VYK3 1845 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PLOD2O00469 737 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PLSCR1O15162 318 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 B4GAT1O43505 415 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 BMP10O95393 424 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 CYP4B1P13584 511 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ELK4P28324 431 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 HARS2P49590 506 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 CLCN3P51790 818 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 WNT7BP56706 349 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SLC6A3Q01959 620 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TNK2Q07912 1038 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SLC13A2Q13183 592 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SPANXN2Q5MJ10 180 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ANGPTL8Q6UXH0 198 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PIWIL3Q7Z3Z3 882 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 FAM35AQ86V20 835 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 HORMAD1Q86X24 394 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 KIAA0319LQ8IZA0 1049 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 NIPA2Q8N8Q9 360 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ZNF280CQ8ND82 737 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 UBASH3BQ8TF42 649 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 FBXL18Q96ME1 805 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ZNF778Q96MU6 729 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 MTIF3Q9H2K0 278 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 RPF2Q9H7B2 306 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 OXSMQ9NWU1 459 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ADAM28Q9UKQ2 775 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 RNF11Q9Y3C5 154 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PRORSD1PA6NEY8 169 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TMEM221A6NGB7 291 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 CCRL2O00421 344 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SYNCRIPO60506 623 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 ENTPD3O75355 529 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SNAP29O95721 258 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SUPT20HL2P0C7V6 817 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 IL7RP16871 459 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 YWHAQP27348 245 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 BCAT1P54687 386 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PHC1P78364 1004 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 CDH17Q12864 832 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SNX17Q15036 470 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 SUPT20HL1Q3ZLR7 823 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TIGD2Q4W5G0 525 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 FBXO48Q5FWF7 155 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 GJC2Q5T442 439 aaPredicted RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 STRIP1Q5VSL9 837 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ZCCHC8Q6NZY4 707 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 THAP5Q7Z6K1 395 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 RALGPS2Q86X27 583 aaPredicted RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 TMEM126BQ8IUX1 230 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PSTKQ8IV42 348 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 RNF139Q8WU17 664 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 STARD8Q92502 1023 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TSPAN17Q96FV3 270 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 CPB2Q96IY4 423 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 RPL10LQ96L21 214 aaKnown RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 CSPG4P5Q96PW8 444 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 PEBP4Q96S96 227 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 FAM49AQ9H0Q0 323 aaPredicted RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 EXD2Q9NVH0 621 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 ARHGAP28Q9P2N2 729 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
BDNF-210ENST00000438929 BTBD3Q9Y2F9 522 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 GIT1Q9Y2X7 761 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TRAF6Q9Y4K3 522 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 UBIAD1Q9Y5Z9 338 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 LAMB4A4D0S4 1761 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 CCDC154A6NI56 674 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 EIF3FO00303 357 aaPredicted RBP6.19□□□□□ -1.42
BDNF-210ENST00000438929 AP1G1O43747 822 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 FAM20BO75063 409 aa6.19□□□□□ -1.42
BDNF-210ENST00000438929 NFICP08651 508 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms