RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SLC45A1Q9Y2W3 748 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 NFE2L3Q9Y4A8 694 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 NPIPB15A6NHN6 443 aaPredicted RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 I6L893 689 aaPredicted RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 RGS14O43566 566 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 RGS11O94810 467 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 SOX30O94993 753 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 SCGB1D1O95968 90 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 ETFAP13804 333 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 ARL3P36405 182 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 CASP2P42575 452 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 RXRGP48443 463 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 NUDT6P53370 316 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 CLNS1AP54105 237 aaKnown RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 RAD23BP54727 409 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 RPS3AP61247 264 aaKnown RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 OLR1P78380 273 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 GPS2Q13227 327 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 MAMLD1Q13495 774 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 OLIG2Q13516 323 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 KRT32Q14532 448 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 SHBQ15464 509 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 KRT24Q2M2I5 525 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 HYIQ5T013 277 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 AWAT2Q6E213 333 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM180BQ6P0A1 224 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 Q6ZSV7 163 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 LINGO2Q7L985 606 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 PARP16Q8N5Y8 322 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 SCCPDHQ8NBX0 429 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 BEST2Q8NFU1 509 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 GTF3C6Q969F1 213 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 APOLD1Q96LR9 279 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 LRFN5Q96NI6 719 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 NAP1L5Q96NT1 182 aaPredicted RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 NTPCRQ9BSD7 190 aaKnown RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 USP44Q9H0E7 712 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 PCDHB16Q9NRJ7 776 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 TMEM51Q9NW97 253 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 DLGAP2Q9P1A6 1054 aa3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 AAR2Q9Y312 384 aaKnown RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 LSM4Q9Y4Z0 139 aaKnown RBP3.91□□□□□ -1.78
LSM1P1-201ENST00000438629 TTC3P53804 2025 aa3.9□□□□□ -1.78
LSM1P1-201ENST00000438629 PGPEP1LA6NFU8 196 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 NPIPB11E5RHQ5 1161 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 WNT9BO14905 357 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 RNASEH2AO75792 299 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 VNN2O95498 520 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 GLUD1P00367 558 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 DDX5P17844 614 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 CDH2P19022 906 aaPredicted RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 AGAP20933 346 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 NFKBIAP25963 317 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 THPOP40225 353 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 GLUD2P49448 558 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 CXCR3P49682 368 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TMEM115Q12893 351 aaPredicted RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TRAF1Q13077 416 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 MYBPC2Q14324 1141 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 DRAP1Q14919 205 aaPredicted RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TBCEQ15813 527 aaPredicted RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 ZNF284Q2VY69 593 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TDRD12Q587J7 1177 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 EFHC1Q5JVL4 640 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 CCDC30Q5VVM6 783 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 DHX40Q8IX18 779 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 ADSSL1Q8N142 457 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 NGEFQ8N5V2 710 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 MIGA1Q8NAN2 632 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 POMGNT1Q8WZA1 660 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 SGCDQ92629 289 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TMEM68Q96MH6 324 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 TIGD1Q96MW7 591 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 STRA6Q9BX79 667 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 KRT84Q9NSB2 600 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 OR6C3Q9NZP0 311 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 CTNNAL1Q9UBT7 734 aa3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 LIMA1Q9UHB6 759 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 INTS6Q9UL03 887 aaKnown RBP3.9□□□□□ -1.79
LSM1P1-201ENST00000438629 IGHV4-28A0A0C4DH34 117 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PI4KAP2A4QPH2 592 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 LDLRAD4O15165 306 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 BCAT2O15382 392 aaPredicted RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 KLK8O60259 260 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 USO1O60763 962 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ZBED4O75132 1171 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 SEC31AO94979 1220 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 CAPN3P20807 821 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 SHMT1P34896 483 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PIP4K2AP48426 406 aaPredicted RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 AMTP48728 403 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 EFNA5P52803 228 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PMS2P54278 862 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 EIF5P55010 431 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ARF3P61204 181 aaPredicted RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PRAMEP78395 509 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ARF1P84077 181 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms