RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PLEKHA5Q9HAU0 1116 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 BRF2Q9HAW0 419 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 SMYD2Q9NRG4 433 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 TMEM51Q9NW97 253 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 A4GNTQ9UNA3 340 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 FAM96BQ9Y3D0 163 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 INSL5Q9Y5Q6 135 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 A3GALT2U3KPV4 340 aa3.81□□□□□ -1.8
TRAPPC13-204ENST00000438419 INAFM1C9JVW0 142 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 USO1O60763 962 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 NDUFB4O95168 129 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 MT-CYBP00156 380 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 TFP02787 698 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 HOXB5P09067 269 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 UBL4AP11441 157 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 CHATP28329 748 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 NUDT6P53370 316 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PMS2P54278 862 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 NANOS2P60321 138 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 DSC1Q08554 894 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 ITGADQ13349 1161 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 DCTN2Q13561 401 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 HNF4GQ14541 408 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PPP2R5BQ15173 497 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 TBCEQ15813 527 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 GSTA3Q16772 222 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PRAMEF19Q5SWL8 479 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 MZT2BQ6NZ67 158 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 DIS3L2Q8IYB7 885 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 CCDC105Q8IYK2 499 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PARP16Q8N5Y8 322 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 MIGA1Q8NAN2 632 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 GPT2Q8TD30 523 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 FBXL8Q96CD0 374 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 MXRA8Q9BRK3 442 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PCDHB16Q9NRJ7 776 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 CYSLTR2Q9NS75 346 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 TBC1D22BQ9NU19 505 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 CTNNAL1Q9UBT7 734 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 MYO6Q9UM54 1294 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PCDHA7Q9UN72 937 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 PTGDR2Q9Y5Y4 395 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 SCINQ9Y6U3 715 aa3.8□□□□□ -1.8
TRAPPC13-204ENST00000438419 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A1B0GVT2 93 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 FAM90A8PA6NJQ4 464 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 LRRC53A6NM62 1247 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZBED4O75132 1171 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 SEC14L2O76054 403 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 DDX58O95786 925 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 HOXC6P09630 235 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 FAM90A13PP0C7W8 464 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 FAM90A24PP0C7X0 464 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 HSPA1AP0DMV8 641 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 HSPA1BP0DMV9 641 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 SNHG28P0DPA3 235 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CD58P19256 250 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 EDN2P20800 178 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CHMP24386 653 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 MLH1P40692 756 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 AMTP48728 403 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CXCR3P49682 368 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 HTR6P50406 440 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 Q0VFX4 171 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 PDE1CQ14123 709 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 ERV3-1Q14264 604 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 MYBPC2Q14324 1141 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 TCTN1Q2MV58 587 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 C8orf82Q6P1X6 216 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CFAP161Q6P656 301 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 PDXDC1Q6P996 788 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 KLHL24Q6TFL4 600 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZNF517Q6ZMY9 492 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 NEK10Q6ZWH5 1172 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZDHHC17Q8IUH5 632 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CADM4Q8NFZ8 388 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 B4GALNT2Q8NHY0 566 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 METTL6Q8TCB7 284 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 ADAMTS15Q8TE58 950 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 OIT3Q8WWZ8 545 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 PRKRIP1Q9H875 184 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CLK4Q9HAZ1 481 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 SLC45A1Q9Y2W3 748 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 PAM16Q9Y3D7 125 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 LAS1LQ9Y4W2 734 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 CKAP5Q14008 2032 aa3.79□□□□□ -1.8
TRAPPC13-204ENST00000438419 FSD2A1L4K1 749 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ANKRD18BA2A2Z9 1011 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 PI4KAP2A4QPH2 592 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 USP17L23D6RBM5 183 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NPIPB11E5RHQ5 1161 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 F5H0A9 414 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 KLK8O60259 260 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RGS11O94810 467 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CENPBP07199 599 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ETFAP13804 333 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 GPTP24298 496 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 THBS3P49746 956 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 GNAQP50148 359 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms