RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FAM72BQ86X60 149 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 HID1Q8IV36 788 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RBFAQ8N0V3 343 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ARL10Q8N8L6 244 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 JOSD2Q8TAC2 188 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 HMCESQ96FZ2 354 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ATXN7L3BQ96GX2 97 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 HIC2Q96JB3 615 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 TBATAQ96M53 351 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 MCEEQ96PE7 176 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 CNPY3Q9BT09 278 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 LRRC61Q9BV99 259 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 DPH1Q9BZG8 443 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 STRADBQ9C0K7 418 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 GPR27Q9NS67 375 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 NDFIP2Q9NV92 336 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 DKK3Q9UBP4 350 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 GULP1Q9UBP9 304 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 PADI4Q9UM07 663 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 SATB2Q9UPW6 733 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ACTL7AQ9Y615 435 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ARID1BQ8NFD5 2236 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 CCDC187A0A096LP49 1063 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 LY6G6EA0A0G2JKS1 128 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 EME2A4GXA9 379 aaPredicted RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 ARHGAP42A6NI28 874 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SIGLEC16A6NMB1 481 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 LGALS16A8MUM7 142 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 TMX2-CTNND1H3BSU7 103 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 ERVH48-1M5A8F1 160 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 CACNB4O00305 520 aaPredicted RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 CCP110O43303 1012 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 PIGNO95427 931 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 PCCBP05166 539 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GIMD1P0DJR0 217 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 TGM2P21980 687 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 KELP23276 732 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SERPINA4P29622 427 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 HTR7P34969 479 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GMPRP36959 345 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 ANP32AP39687 249 aaKnown RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 KLK7P49862 253 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 JAM2P57087 298 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 MYL5Q02045 173 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 EIF2B5Q13144 721 aaKnown RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 BIRC2Q13490 618 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SERINC3Q13530 473 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 TCEA2Q15560 299 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 RAB6CQ53S08 254 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 DPY19L2P1Q6NXN4 242 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 WDR59Q6PJI9 974 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GKN2Q86XP6 184 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 PHF13Q86YI8 300 aaPredicted RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 JAMLQ86YT9 394 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SLC35F3Q8IY50 421 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 WDR36Q8NI36 951 aaKnown RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 CENPIQ92674 756 aaPredicted RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 EXOC2Q96KP1 924 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GFM1Q96RP9 751 aaKnown RBP7.83□□□□□ -1.16
VPS50-203ENST00000436177 CCDC3Q9BQI4 270 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 RAB6CQ9H0N0 254 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 ATP13A3Q9H7F0 1226 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SP110Q9HB58 689 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 CPNE5Q9HCH3 593 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 ANO10Q9NW15 660 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 GPR34Q9UPC5 381 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 MFHAS1Q9Y4C4 1052 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 U3KQA8 63 aa7.83□□□□□ -1.16
VPS50-203ENST00000436177 PIEZO2Q9H5I5 2752 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 TP53BP1Q12888 1972 aaPredicted RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 SMG1Q96Q15 3661 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 EIF3CLB5ME19 914 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 EPHB6O15197 1021 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 YY2O15391 372 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 SPINT1O43278 529 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 GCATO75600 419 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 TNFSF15O95150 251 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CD160O95971 181 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 ITGA2BP08514 1039 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 C6P13671 934 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 TSHRP16473 764 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 FERP16591 822 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CHRNB2P17787 502 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 NFKBIAP25963 317 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 PEX5P50542 639 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 HK3P52790 923 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 COPB1P53618 953 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 GSCP56915 257 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms