RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PQLC1Q8N2U9 271 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 HSPBAP1Q96EW2 488 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 IPO11Q9UI26 975 aaKnown RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 WDR37Q9Y2I8 494 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NLRC5Q86WI3 1866 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 PTPRDP23468 1912 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 OR51F1A6NGY5 319 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NDUFB5O43674 189 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 THPOP40225 353 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 KCNC1P48547 511 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 SULT2A1Q06520 285 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ZNF33AQ06730 810 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 MGAT3Q09327 533 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 SLC10A7Q0GE19 358 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 FLOT2Q14254 428 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 UGP2Q16851 508 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 POTEHQ6S545 545 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 PHF21BQ96EK2 531 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 KLHL32Q96NJ5 620 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 SMOC2Q9H3U7 446 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 WDR41Q9HAD4 459 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 KCNU1A8MYU2 1149 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 PDLIM1O00151 329 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 CNTN5O94779 1100 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 STAMBPO95630 424 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 CYP11A1P05108 521 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NFKBIAP25963 317 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ARSDP51689 593 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 GEMP55040 296 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 HPCAP84074 193 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 GK3PQ14409 553 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 TLR1Q15399 786 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 TAF1CQ15572 869 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 MMEL1Q495T6 779 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 OGFRL1Q5TC84 451 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 KDELC1Q6UW63 502 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 MRPL10Q7Z7H8 261 aaKnown RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 SCN4BQ8IWT1 228 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 BHLHE22Q8NFJ8 381 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NACA2Q9H009 215 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 COPS7BQ9H9Q2 264 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ENTPD7Q9NQZ7 604 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ABCC13Q9NSE7 274 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 PSMD13Q9UNM6 376 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 KCTD3Q9Y597 815 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 SCN10AQ9Y5Y9 1956 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 IGHA2P01877 340 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 COL6A2P12110 1019 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 TMED10P49755 219 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 FOLH1Q04609 750 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 ALFQ53S48 1182 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 AFMIDQ63HM1 303 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 TMEM207Q6UWW9 146 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PTAR1Q7Z6K3 402 aaPredicted RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 SAPCD2Q86UD0 394 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 SERINC5Q86VE9 423 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 METTL23Q86XA0 190 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PCDH20Q8N6Y1 951 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 RTL3Q8N8U3 475 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 CATSPERBQ9H7T0 1116 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 M0QZQ0 153 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PSMD3O43242 534 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 TBX18O95935 607 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 DNAJB2P25686 324 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 CD86P42081 329 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 DSC2Q02487 901 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PTPRCAPQ14761 206 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 DDR2Q16832 855 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 TECRLQ5HYJ1 363 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 BRMS1LQ5PSV4 323 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 KIAA0930Q6ICG6 404 aaPredicted RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 C16orf89Q6UX73 402 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PIM3Q86V86 326 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 C2orf69Q8N8R5 385 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 HMCESQ96FZ2 354 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 MAELQ96JY0 434 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 ADAM2Q99965 735 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 MRPL57Q9BQC6 102 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PRPF19Q9UMS4 504 aaKnown RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 LZTS1Q9Y250 596 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 GMEB1Q9Y692 573 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 A8MT66 165 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 AP3B1O00203 1094 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 TRPA1O75762 1119 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 ITKQ08881 620 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 CST9Q5W186 159 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 PGAM4Q8N0Y7 254 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 DCUN1D1Q96GG9 259 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 ABI2Q9NYB9 513 aaPredicted RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 NCKIPSDQ9NZQ3 722 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 MARCH4Q9P2E8 410 aaPredicted RBP10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 VTI1BQ9UEU0 232 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 Q9Y3F1 56 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 DTNAQ9Y4J8 743 aa10.47□□□□□ -0.73
CLSTN1-203ENST00000435891 MYOCOSA0A1B0GUC4 107 aa10.46□□□□□ -0.73
CLSTN1-203ENST00000435891 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms