RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FCHO2Q0JRZ9 810 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 BMPR2Q13873 1038 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 MINDY4Q4G0A6 757 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SLC47A2Q86VL8 602 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CCDC36Q8IYA8 594 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CDYL2Q8N8U2 506 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ZFRQ96KR1 1074 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 MYOCQ99972 504 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 XPR1Q9UBH6 696 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 OR6C75A6NL08 312 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 OR10H3O60404 316 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 RNASEH2AO75792 299 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 MT-CO1P00395 513 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 LPOP22079 712 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 AMPD1P23109 780 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF720Q7Z2F6 126 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 C8orf59Q8N0T1 100 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ADAMTS15Q8TE58 950 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 WDR60Q8WVS4 1066 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 HEBP2Q9Y5Z4 205 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 LTA4HP09960 611 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CCKBRP32239 447 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CLCN5P51795 746 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 BEX3Q00994 111 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 NAA30Q147X3 362 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SGCBQ16585 318 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 STOX1Q6ZVD7 989 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ACTL9Q8TC94 416 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SMG7Q92540 1137 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 FEM1CQ96JP0 617 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CDC40O60508 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 NEPROQ6NW34 567 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PSTKQ8IV42 348 aaKnown RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 TM6SF2Q9BZW4 377 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 GRIP2Q9C0E4 1043 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 RNF121Q9H920 327 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 NEDD8-MDP1E9PL57 170 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 LOC110117498-PIK3R3F6TDL0 507 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ATG13O75143 517 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PPP3R1P63098 170 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 FAM153CQ494X1 144 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 C9orf64Q5T6V5 341 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 FSTL5Q8N475 847 aaPredicted RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 OR2W6PQ8NHA6 318 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ATG4AQ8WYN0 398 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PIK3R3Q92569 461 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PPCDCQ96CD2 204 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 DYTNA2CJ06 578 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 CCDC182A6NF36 153 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PGK1P00558 417 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 LRPAP1P30533 357 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 USP46P62068 366 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 MAPK14Q16539 360 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 RAVER1Q8IY67 606 aaKnown RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 MNTQ99583 582 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ARF4P18085 180 aaPredicted RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 GABRR2P28476 465 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 CAPN13Q6MZZ7 669 aaPredicted RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 GPALPP1Q8IXQ4 340 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ULBP1Q9BZM6 244 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 H0YGN5 161 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 NTSR2O95665 410 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 MTF1Q14872 753 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 EHD3Q9NZN3 535 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 GRIN2DO15399 1336 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 PRNPP04156 253 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 KLHL26Q53HC5 615 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 DEFB132Q7Z7B7 95 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ATP6V1C2Q8NEY4 427 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 HERVK_113Q902F9 699 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 ZIM3Q96PE6 472 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 TNKS2Q9H2K2 1166 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 GPN1Q9HCN4 374 aaPredicted RBP11.24□□□□□ -0.61
SCN4A-201ENST00000435607 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 SSR3Q9UNL2 185 aa11.24□□□□□ -0.61
SCN4A-201ENST00000435607 TMEM88BA6NKF7 163 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TNFAIP8O95379 198 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 NT5EP21589 574 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PDHA2P29803 388 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF155Q12901 538 aaPredicted RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 GPR156Q8NFN8 814 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms