RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 REXO2Q9Y3B8 237 aaKnown RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 HEY1Q9Y5J3 304 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 CEP295Q9C0D2 2601 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 CFAP69A5D8W1 941 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 RAD51BO15315 384 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 PJA2O43164 708 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMPD4-207ENST00000435455 CCNB1P14635 433 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 ITIH2P19823 946 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 CDKN2BP42772 138 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 RABIFP47224 123 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
SMPD4-207ENST00000435455 MAXP61244 160 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 ITKQ08881 620 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 PDK1Q15118 436 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 TRIP6Q15654 476 aaKnown RBP16.37■□□□□ 0.21
SMPD4-207ENST00000435455 TAZQ16635 292 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 PRAMEF14Q5SWL7 426 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 ALG1LQ6GMV1 187 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 CCDC13Q8IYE1 715 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 KATNAL2Q8IYT4 538 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 RHBDD1Q8TEB9 315 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 RBM41Q96IZ5 413 aaKnown RBP16.37■□□□□ 0.21
SMPD4-207ENST00000435455 BMFQ96LC9 184 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 NSMCE3Q96MG7 304 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 CAMK1GQ96NX5 476 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 KLF6Q99612 283 aaPredicted RBP16.37■□□□□ 0.21
SMPD4-207ENST00000435455 BRD8Q9H0E9 1235 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 RBM22Q9NW64 420 aaKnown RBP eCLIP16.37■□□□□ 0.217e-10■■■■■ 34.5
SMPD4-207ENST00000435455 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 PCDHGC4Q9Y5F7 938 aa16.37■□□□□ 0.21
SMPD4-207ENST00000435455 TTC24A2A3L6 582 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 POM121BA6NF01 834 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 TOR1BO14657 336 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 PPP1R12AO14974 1030 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 CBFA2T3O75081 653 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 CPP00450 1065 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 ITGAVP06756 1048 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 EPHA8P29322 1005 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 FAM193AP78312 1265 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 SIM1P81133 766 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 IL9RQ01113 521 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 PPIDQ08752 370 aaKnown RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 SPOCD1Q6ZMY3 1216 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 Q6ZSR6 202 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 DPPA4Q7L190 304 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 BZW1Q7L1Q6 419 aaKnown RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 GLRX5Q86SX6 157 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 RCOR2Q8IZ40 523 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 EXD1Q8NHP7 514 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 PDCD6IPQ8WUM4 868 aaKnown RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 CENPTQ96BT3 561 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 IFT43Q96FT9 208 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 SEMA3CQ99985 751 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 LACRTQ9GZZ8 138 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 DUSP10Q9Y6W6 482 aa16.36■□□□□ 0.21
SMPD4-207ENST00000435455 TDRD6O60522 2096 aaKnown RBP16.36■□□□□ 0.21
SMPD4-207ENST00000435455 SPAARA0A1B0GVQ0 90 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 KRT10P13645 584 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 C6P13671 934 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 CA4P22748 312 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 NR2C2P49116 596 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 LIG3P49916 1009 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 DYNLT1P63172 113 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 IFI35P80217 286 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-207ENST00000435455 TRAF2Q12933 501 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 AGERQ15109 404 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 SHBQ15464 509 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 TFDP3Q5H9I0 405 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 BAHD1Q8TBE0 780 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-207ENST00000435455 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 LGMNQ99538 433 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 GPR27Q9NS67 375 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 PHTF1Q9UMS5 762 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 BTBD3Q9Y2F9 522 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 TTLL3Q9Y4R7 772 aa16.35■□□□□ 0.21
SMPD4-207ENST00000435455 COL5A1P20908 1838 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-207ENST00000435455 SPTY2D1-AS1A0A0U1RR47 76 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-207ENST00000435455 JCHAINP01591 159 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 PRKCGP05129 697 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 ELFN1P0C7U0 828 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 CYP2A6P11509 494 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-207ENST00000435455 TGM2P21980 687 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 CTNNA1P35221 906 aaKnown RBP16.34■□□□□ 0.21
SMPD4-207ENST00000435455 IGFALSP35858 605 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 PFN3P60673 137 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 COPS2P61201 443 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 YPEL5P62699 121 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 AP1B1Q10567 949 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 KIF5AQ12840 1032 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 LRRC14Q15048 493 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 ARMC12Q5T9G4 340 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 KAZNQ674X7 775 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 LIPIQ6XZB0 460 aa16.34■□□□□ 0.21
SMPD4-207ENST00000435455 GATAD2AQ86YP4 633 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms