RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KDELC2Q7Z4H8 507 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ZNF354CQ86Y25 554 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 CILP2Q8IUL8 1156 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PELI3Q8N2H9 469 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 BBS5Q8N3I7 341 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ICA1LQ8NDH6 482 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 GPR150Q8NGU9 434 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 FBXO32Q969P5 355 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
CD44-210ENST00000434472 IFT43Q96FT9 208 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 UBXN10Q96LJ8 280 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ZNF599Q96NL3 588 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 GBP5Q96PP8 586 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 MRPL1Q9BYD6 325 aaKnown RBP10.48□□□□□ -0.73
CD44-210ENST00000434472 Q9H521 79 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 MEAF6Q9HAF1 191 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 DTNAQ9Y4J8 743 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ASB3Q9Y575 518 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 UBDO15205 165 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RAMP2O60895 175 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 GPC4O75487 556 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SKAP2O75563 359 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 S1PR4O95977 384 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 EPOP01588 193 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 CCDC166P0CW27 439 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PIM1P11309 404 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 ENO3P13929 434 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 FLT3LGP49771 235 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ERFP50548 548 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 NFKB2Q00653 900 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 DSC2Q02487 901 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ACVR1Q04771 509 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SERINC3Q13530 473 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 POLD3Q15054 466 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 CTXN3Q4LDR2 81 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PPM1LQ5SGD2 360 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RARS2Q5T160 578 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 LPCAT4Q643R3 524 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RAP1GAP2Q684P5 730 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ZNF280DQ6N043 979 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MRNIPQ6NTE8 343 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 FAM43BQ6ZT52 329 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 RAB44Q7Z6P3 723 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 TFAP2DQ7Z6R9 452 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 CUZD1Q86UP6 607 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ZNF280BQ86YH2 543 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ST13P4Q8IZP2 240 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 PQLC1Q8N2U9 271 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SPATA6LQ8N4H0 392 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 HIPK4Q8NE63 616 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SHKBP1Q8TBC3 707 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ARRDC2Q8TBH0 407 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 TOP1MTQ969P6 601 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PSMG2Q969U7 264 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 L3HYPDHQ96EM0 354 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SGF29Q96ES7 293 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SPATA17Q96L03 361 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PPP1R36Q96LQ0 422 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 LRGUKQ96M69 825 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 TSC22D3Q99576 134 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 OLFM1Q99784 485 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 YIPF3Q9GZM5 350 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 POLR1EQ9GZS1 481 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 EBF3Q9H4W6 596 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.47□□□□□ -0.73
CD44-210ENST00000434472 GABRQQ9UN88 632 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 NYNRINQ9P2P1 1898 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 MYO16Q9Y6X6 1858 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SLC12A8A0AV02 714 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 F8W810 466 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 CFLARO15519 480 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 AHCYL1O43865 530 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 BCAS2O75934 225 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 CNTN5O94779 1100 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SORBS2O94875 1100 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 GLP2RO95838 553 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 IGLV3-27P01718 113 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MYCNP04198 464 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 UBTFL6P0CB48 400 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 OGNP20774 298 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 PSMD8P48556 350 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 HSPA13P48723 471 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 THOP1P52888 689 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MAXP61244 160 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 NAA20P61599 178 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MRPL58Q14197 206 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 ZNF235Q14590 738 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ALFQ53S48 1182 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SFT2D3Q587I9 215 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SIRPB2Q5JXA9 342 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 CLLU1OSQ5K130 101 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 C10orf120Q5SQS8 335 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms