RNA–Protein interactions for RNA: ENST00000434068.1

C1orf228-208, Transcript of Uncharacterized protein C1orf228, human

APPRIS ALT2 TSL 3

Gene C1orf228, Length 490 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-208	ENST00000434068	SLC25A11	Q02978	314 aa	Known RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	CYP4F3	Q08477	520 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	EIF2B5	Q13144	721 aa	Known RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	TRIM14	Q14142	442 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	NFKBIB	Q15653	356 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ALKBH5	Q6P6C2	394 aa	Known RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	KDM7A	Q6ZMT4	941 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ARHGAP36	Q6ZRI8	547 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	POLN	Q7Z5Q5	900 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	CAMK1D	Q8IU85	385 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	BBS5	Q8N3I7	341 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ATPAF2	Q8N5M1	289 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	DCBLD1	Q8N8Z6	715 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ATL2	Q8NHH9	583 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	CPLX3	Q8WVH0	158 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ECHDC3	Q96DC8	303 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	CSPG4P5	Q96PW8	444 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	IL12RB2	Q99665	862 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	SLC13A1	Q9BZW2	595 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	NRSN2	Q9GZP1	204 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	PCDH18	Q9HCL0	1135 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	SCUBE2	Q9NQ36	999 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	MBNL1	Q9NR56	388 aa	Known RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	LCMT1	Q9UIC8	334 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	LHX6	Q9UPM6	363 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	RAX	Q9Y2V3	346 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	COQ6	Q9Y2Z9	468 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	GPSM3	Q9Y4H4	160 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	CFAP47	Q6ZTR5	3102 aa		11.18	□□□□□ -0.62
C1orf228-208	ENST00000434068	ZFC3H1	O60293	1989 aa	Known RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LY6G6E	A0A0G2JKS1	128 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068		A0A1W2PQ67	120 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	MYO1F	O00160	1098 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	CBFA2T2	O43439	604 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LZTS3	O60299	673 aa	Predicted RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	SOCS5	O75159	536 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	NEBL	O76041	1014 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	ELFN1	P0C7U0	828 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	ITIH2	P19823	946 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	AMPD1	P23109	780 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	NFKBIA	P25963	317 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	HTR1B	P28222	390 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	HNRNPH3	P31942	346 aa	Known RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	CASP14	P31944	242 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	EIF4A3	P38919	411 aa	Known RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LIG3	P49916	1009 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	SCNN1B	P51168	640 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	BLK	P51451	505 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	CDH6	P55285	790 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	PPARD	Q03181	441 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	MTM1	Q13496	603 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	KRT81	Q14533	505 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	RTP5	Q14D33	572 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	HADH	Q16836	314 aa	Known RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	PRRT3	Q5FWE3	981 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	RALGPS1	Q5JS13	557 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	CCDC122	Q5T0U0	273 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	DPPA4	Q7L190	304 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	ZSWIM9	Q86XI8	627 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	RBFA	Q8N0V3	343 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	FSTL5	Q8N475	847 aa	Predicted RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LMX1A	Q8TE12	382 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	NSMCE1	Q8WV22	266 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	GLMN	Q92990	594 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	DEPDC7	Q96QD5	511 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LRRC61	Q9BV99	259 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	XPO4	Q9C0E2	1151 aa	Known RBP	11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	KLF15	Q9UIH9	416 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	SALL4	Q9UJQ4	1053 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	NENF	Q9UMX5	172 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068		U3KQA8	63 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	RP1	P56715	2156 aa		11.17	□□□□□ -0.62
C1orf228-208	ENST00000434068	LMO7DN	F2Z398	122 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	TRAFD1	O14545	582 aa	Predicted RBP	11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	MUSK	O15146	869 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	OPA1	O60313	960 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	RASGRP1	O95267	797 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	MT-CO3	P00414	261 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	CP	P00450	1065 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	PCCB	P05166	539 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	ANXA6	P08133	673 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	SSR1	P43307	286 aa	Known RBP	11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	RPIA	P49247	311 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	SLC10A7	Q0GE19	358 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	RALGDS	Q12967	914 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	NFATC4	Q14934	902 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	NR0B2	Q15466	257 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	WSCD2	Q2TBF2	565 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	DEFB133	Q30KQ1	61 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	C6orf132	Q5T0Z8	1188 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	FAXC	Q5TGI0	409 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	LRRC49	Q8IUZ0	686 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	FAM71B	Q8TC56	605 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	IFI44	Q8TCB0	444 aa		11.16	□□□□□ -0.62
C1orf228-208	ENST00000434068	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms