RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CCNYL1Q8N7R7 359 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 ANKRD49Q8WVL7 239 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 HDAC10Q969S8 669 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 FAM136AQ96C01 138 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 UBXN10Q96LJ8 280 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 SEMA3CQ99985 751 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 BATF3Q9NR55 127 aa17.1■□□□□ 0.33
CTSD-204ENST00000433655 SLC38A8A6NNN8 435 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 SLCO1B7G3V0H7 640 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 ALDH2P05091 517 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 CDKN2DP55273 166 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 ACVR1Q04771 509 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 TMEM198Q66K66 360 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 TRIM67Q6ZTA4 783 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 ARHGAP26Q9UNA1 814 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 SCN5AQ14524 2016 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 A8MT66 165 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 ADAM12O43184 909 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 INHAP05111 366 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 LTA4HP09960 611 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 HOXD9P28356 352 aaPredicted RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 KPNA2P52292 529 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 TBL3Q12788 808 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 PTPRCAPQ14761 206 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 PIWIL4Q7Z3Z4 852 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 SNX32Q86XE0 403 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 CFAP52Q8N1V2 620 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 MAELQ96JY0 434 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 POLR1EQ9GZS1 481 aaKnown RBP17.09■□□□□ 0.33
CTSD-204ENST00000433655 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 CDYLQ9Y232 598 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 ACTL7AQ9Y615 435 aa17.09■□□□□ 0.33
CTSD-204ENST00000433655 A0A0D9SEW6 157 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 GALTP07902 379 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 CCDC166P0CW27 439 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 AP2B1P63010 937 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 SULT2A1Q06520 285 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 ASPHQ12797 758 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 NOGQ13253 232 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 ACAD11Q709F0 780 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 HPS6Q86YV9 775 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 RNF135Q8IUD6 432 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 LGI2Q8N0V4 545 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 RAET1EQ8TD07 263 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 FEM1CQ96JP0 617 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 NSMCE3Q96MG7 304 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 CATSPER2Q96P56 530 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 SUDS3Q9H7L9 328 aaPredicted RBP17.08■□□□□ 0.33
CTSD-204ENST00000433655 S100A14Q9HCY8 104 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 NCKIPSDQ9NZQ3 722 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 G3BP2Q9UN86 482 aaKnown RBP17.08■□□□□ 0.33
CTSD-204ENST00000433655 POMPQ9Y244 141 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 ANKRD36A6QL64 1941 aa17.08■□□□□ 0.33
CTSD-204ENST00000433655 SDHDO14521 159 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
CTSD-204ENST00000433655 FKBP6O75344 327 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 HNRNPLP14866 589 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTSD-204ENST00000433655 PPARGP37231 505 aaPredicted RBP17.08■□□□□ 0.32
CTSD-204ENST00000433655 MTTPP55157 894 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 TIAL1Q01085 375 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTSD-204ENST00000433655 GALNT3Q14435 633 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 SEMA3AQ14563 771 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 FAM83EQ2M2I3 478 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 SH2D4BQ5SQS7 431 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 ACBD5Q5T8D3 534 aaPredicted RBP17.08■□□□□ 0.32
CTSD-204ENST00000433655 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 AAGABQ6PD74 315 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 FBXW8Q8N3Y1 598 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 MARK4Q96L34 752 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 TBATAQ96M53 351 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 CYP4F12Q9HCS2 524 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 PHF24Q9UPV7 400 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 VWA7Q9Y334 891 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 ARL5AQ9Y689 179 aa17.08■□□□□ 0.32
CTSD-204ENST00000433655 RGSL1A5PLK6 1076 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 EIF4E1BA6NMX2 242 aaKnown RBP17.07■□□□□ 0.32
CTSD-204ENST00000433655 SLC22A2O15244 555 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
CTSD-204ENST00000433655 PRAMEP78395 509 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 AGAP9Q5VTM2 703 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 ZNF549Q6P9A3 640 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 RPS27LQ71UM5 84 aaKnown RBP17.07■□□□□ 0.32
CTSD-204ENST00000433655 PIM3Q86V86 326 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
CTSD-204ENST00000433655 CCDC124Q96CT7 223 aaKnown RBP17.07■□□□□ 0.32
CTSD-204ENST00000433655 TSPAN17Q96FV3 270 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms