RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 GDPD5Q8WTR4 605 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 SCG3Q8WXD2 468 aaKnown RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 CCDC126Q96EE4 140 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ELMO2Q96JJ3 720 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 MRPL57Q9BQC6 102 aaKnown RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 UXTQ9UBK9 157 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 VTI1BQ9UEU0 232 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 A8MUI8 341 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ZNF195O14628 629 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 TEX28O15482 410 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 PHGDHO43175 533 aaKnown RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 SEC24AO95486 1093 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 SERPINF2P08697 491 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 SLC26A3P40879 764 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ALDH1A3P47895 512 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 KCNQ1P51787 676 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 GNA12Q03113 381 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 TUBB3Q13509 450 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 TAF12Q16514 161 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 FAM83EQ2M2I3 478 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 SIRPB2Q5JXA9 342 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 AGAP9Q5VTM2 703 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 PLPP4Q5VZY2 271 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 LRRC8EQ6NSJ5 796 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 EPGNQ6UW88 154 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 FSTL5Q8N475 847 aaPredicted RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ANKRD27Q96NW4 1050 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 EBF4Q9BQW3 602 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 MRPL46Q9H2W6 279 aaKnown RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 SEPT3Q9UH03 358 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 LZTS1Q9Y250 596 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
DDX56-204ENST00000431640 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 MIA3Q5JRA6 1907 aa12.91□□□□□ -0.34
DDX56-204ENST00000431640 ILVBLA1L0T0 632 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 TARM1B6A8C7 271 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 RFXAPO00287 272 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 KDELR3O43731 214 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 ABLIM3O94929 683 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 RBP1P09455 135 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 PGM1P36871 562 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 ACVRL1P37023 503 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 ETFBP38117 255 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 GRIA4P48058 902 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 RPL14P50914 215 aaKnown RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 RAP1GDS1P52306 607 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TAS2R39P59534 338 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 DNAJB13P59910 316 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 PRAMEP78395 509 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 RCN2Q14257 317 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 PPP2R2DQ66LE6 453 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 KLC3Q6P597 504 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TREML1Q86YW5 311 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 CENPLQ8N0S6 344 aaPredicted RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 PGBD5Q8N414 524 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 GPATCH11Q8N954 259 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 BRSK1Q8TDC3 778 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TRMT2BQ96GJ1 504 aaKnown RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 PRR11Q96HE9 360 aaPredicted RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 MIPEPQ99797 713 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 OMDQ99983 421 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 COG4Q9H9E3 785 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 EBF2Q9HAK2 575 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 RNPEPL1Q9HAU8 725 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 PDFQ9HBH1 243 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 CORO1CQ9ULV4 474 aaPredicted RBP12.9□□□□□ -0.34
DDX56-204ENST00000431640 MAFFQ9ULX9 164 aa12.9□□□□□ -0.34
DDX56-204ENST00000431640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 H3BNC9 293 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 NPHS1O60500 1241 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 DIAPH2O60879 1101 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ANP32DO95626 131 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms