RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GAS2O43903 313 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ADAM11O75078 769 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TUBBP07437 444 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 STAG3L2P0CL84 134 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 OSMP13725 252 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 UGT1A4P22310 534 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 DSG3P32926 999 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CIITAP33076 1130 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 UGT1A3P35503 534 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 UGT1A5P35504 534 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 NR4A2P43354 598 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 HIRAP54198 1017 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 USP14P54578 494 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PSME3P61289 254 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ESRRGP62508 458 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 UBAP2LQ14157 1087 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ANKRD26P1Q6NSI1 321 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 NUDT18Q6ZVK8 323 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RFX6Q8HWS3 928 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC71Q8IV32 467 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF398Q8TD17 642 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 HTR3CQ8WXA8 447 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RFFLQ8WZ73 363 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RFT1Q96AA3 541 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 SPACA9Q96E40 222 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 FAM84AQ96KN4 292 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 KRT12Q99456 494 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 DPEP2Q9H4A9 486 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 OSGEPQ9NPF4 335 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ZCCHC3Q9NUD5 404 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RIC8BQ9NVN3 520 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ERAP1Q9NZ08 941 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 DBF4Q9UBU7 674 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 NDOR1Q9UHB4 597 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PCDHA10Q9Y5I2 948 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 DNMBPQ6XZF7 1577 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 LOC390937A0A1W2PQ73 354 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC53A6NM62 1247 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 E7EWF7 191 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RBAK-RBAKDNI3L0D1 243 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ACKR2O00590 384 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PGRMC2O15173 223 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TO15178 435 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PRODHO43272 600 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PPM1BO75688 479 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TXNDC12O95881 172 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 F9P00740 461 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RALAP11233 206 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ACADSP16219 412 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RAB4AP20338 218 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PXNP49023 591 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RPS3AP61247 264 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 HNRNPKP61978 463 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PSPHP78330 225 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ATP2C1P98194 919 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ECT2LQ008S8 904 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MEF2AQ02078 507 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FOXO1Q12778 655 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MAPK7Q13164 816 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ATAD3CQ5T2N8 411 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GPR158Q5T848 1215 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RNLSQ5VYX0 342 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PRR5LQ6MZQ0 368 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RPUSD3Q6P087 351 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 DCLRE1AQ6PJP8 1040 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ERASQ7Z444 233 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 UBQLNLQ8IYU4 475 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CADM2Q8N3J6 435 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC17Q8N6Y2 441 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FLAD1Q8NFF5 587 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 IL17REQ8NFR9 667 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM174AQ8TBP5 190 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 IFI44Q8TCB0 444 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF274Q96GC6 653 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KLHL32Q96NJ5 620 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PSMB7Q99436 277 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 AGAP2Q99490 1192 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PYM1Q9BRP8 204 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM168Q9H0V1 697 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 ELP3Q9H9T3 547 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KCNK13Q9HB14 408 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RBAKQ9NYW8 714 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 CNOT6Q9ULM6 557 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 GUCA1BQ9UMX6 200 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KCNK7Q9Y2U2 307 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MYOM3Q5VTT5 1437 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KIF27Q86VH2 1401 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PIPSLA2A3N6 862 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 MIF4GDA9UHW6 222 aaKnown RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM25AB3EWG3 89 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM25CB3EWG5 89 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 FAM25GB3EWG6 89 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 KPNA4O00629 521 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 TOR1AO14656 332 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 PSMD3O43242 534 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 HTRA2O43464 458 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-203ENST00000430976 RGS10O43665 173 aa5.39□□□□□ -1.55
PTPN4-203ENST00000430976 VEGFDO43915 354 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms