RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 HID1Q8IV36 788 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 SFTPA2Q8IWL1 248 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 EXD3Q8N9H8 876 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 PLA2G15Q8NCC3 412 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 COL26A1Q96A83 441 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 CCDC74AQ96AQ1 378 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 MED8Q96G25 268 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 EXOC2Q96KP1 924 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.01
ATG4B-209ENST00000425239 VPS16Q9H269 839 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 PCDH12Q9NPG4 1184 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 NLRC4Q9NPP4 1024 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 ADAM22Q9P0K1 906 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 OR1A2Q9Y585 309 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 DGKBQ9Y6T7 804 aa15.11■□□□□ 0.01
ATG4B-209ENST00000425239 SPENQ96T58 3664 aaKnown RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 D6RAR5 112 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 PLD2O14939 933 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 CCP110O43303 1012 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 KRT10P13645 584 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 SLC5A2P31639 672 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 UGT1A5P35504 534 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 RGRP47804 291 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 LIG3P49916 1009 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ZNF143P52747 638 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 SRP54P61011 504 aaKnown RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 RAD51Q06609 339 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ZFP36L1Q07352 338 aaKnown RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 KRT31Q15323 416 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 PARP15Q460N3 678 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 FOXR1Q6PIV2 292 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ENPP7Q6UWV6 458 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 TRIM72Q6ZMU5 477 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 CCDC81Q6ZN84 652 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 TMPRSS9Q7Z410 1059 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ENOX1Q8TC92 643 aaKnown RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 C1QTNF7Q9BXJ2 289 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 FAM207AQ9NSI2 230 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 GULP1Q9UBP9 304 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 APPL1Q9UKG1 709 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ATXN7L1Q9ULK2 861 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-209ENST00000425239 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
ATG4B-209ENST00000425239 ANKRD36A6QL64 1941 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 CFAP69A5D8W1 941 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 TMEM202A6NGA9 273 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 PES1O00541 588 aaKnown RBP15.09■□□□□ 0.01
ATG4B-209ENST00000425239 RASGRP1O95267 797 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 ALPIP09923 528 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 HGFP14210 728 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 CCKBRP32239 447 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 TRIM23P36406 574 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 MMP12P39900 470 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 CSNK1DP48730 415 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 OGDHQ02218 1023 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 ELP6Q0PNE2 266 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 RALGDSQ12967 914 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 SRSF6Q13247 344 aaKnown RBP15.09■□□□□ 0.01
ATG4B-209ENST00000425239 EIF3IQ13347 325 aaKnown RBP15.09■□□□□ 0.01
ATG4B-209ENST00000425239 TGIF1Q15583 401 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 RAB11FIP2Q7L804 512 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 DNAAF5Q86Y56 855 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 CAMK1DQ8IU85 385 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 PELI3Q8N2H9 469 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 ECHDC3Q96DC8 303 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 PDXPQ96GD0 296 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 ZNF641Q96N77 438 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-209ENST00000425239 CCNL2Q96S94 520 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-209ENST00000425239 FOXP3Q9BZS1 431 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 LRRN3Q9H3W5 708 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 SIRPGQ9P1W8 387 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 GPR34Q9UPC5 381 aa15.09■□□□□ 0.01
ATG4B-209ENST00000425239 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
ATG4B-209ENST00000425239 PRAMEF11O60813 436 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 PRKCGP05129 697 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 RPLP0P05388 317 aaKnown RBP15.08■□□□□ 0
ATG4B-209ENST00000425239 STAT1P42224 750 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 TCEA2Q15560 299 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 AFMIDQ63HM1 303 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 RD3Q7Z3Z2 195 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 CBARPQ8N350 705 aaPredicted RBP15.08■□□□□ 0
ATG4B-209ENST00000425239 FBXO39Q8N4B4 442 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 ARFGAP1Q8N6T3 406 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 OR1E3Q8WZA6 343 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 GFM1Q96RP9 751 aaKnown RBP15.08■□□□□ 0
ATG4B-209ENST00000425239 SYT11Q9BT88 431 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 SLC39A8Q9C0K1 460 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 DACH1Q9UI36 760 aa15.08■□□□□ 0
ATG4B-209ENST00000425239 ARHGEF17Q96PE2 2063 aaPredicted RBP15.08■□□□□ 0
ATG4B-209ENST00000425239 UBR5O95071 2799 aaPredicted RBP15.07■□□□□ 0
ATG4B-209ENST00000425239 LRRC10BA6NIK2 292 aa15.07■□□□□ 0
ATG4B-209ENST00000425239 PYCARD-AS1I3L0S3 204 aa15.07■□□□□ 0
ATG4B-209ENST00000425239 TRAFD1O14545 582 aaPredicted RBP15.07■□□□□ 0
ATG4B-209ENST00000425239 CREB3O43889 395 aa15.07■□□□□ 0
ATG4B-209ENST00000425239 FUCA1P04066 466 aa15.07■□□□□ 0
ATG4B-209ENST00000425239 HOXC4P09017 264 aaPredicted RBP15.07■□□□□ 0
ATG4B-209ENST00000425239 CTSEP14091 401 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms