RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 LRP8Q14114 963 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 RFTN1Q14699 578 aaPredicted RBP14.44□□□□□ -0.1
MSH5-206ENST00000423982 HERC3Q15034 1050 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 C6orf10Q5SRN2 563 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 OTOP3Q7RTS5 596 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ZNF554Q86TJ5 538 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 RNF135Q8IUD6 432 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 OSBPL11Q9BXB4 747 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 TRIM8Q9BZR9 551 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 IL1RL2Q9HB29 575 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 THEGQ9P2T0 379 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ARVCFO00192 962 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 DCLK1O15075 740 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 RECQL4O94761 1208 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 CKBP12277 381 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 NME5P56597 212 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 DPYSQ14117 519 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 SLC25A52Q3SY17 297 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 KCTD11Q693B1 232 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ZBTB49Q6ZSB9 765 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 STRADAQ7RTN6 431 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 PIGZQ86VD9 579 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ZDHHC17Q8IUH5 632 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ZNF786Q8N393 782 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 ANKRD52Q8NB46 1076 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 SPATA22Q8NHS9 363 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 CANT1Q8WVQ1 401 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 RPL10LQ96L21 214 aaKnown RBP14.44□□□□□ -0.1
MSH5-206ENST00000423982 ZFP42Q96MM3 310 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 GPR78Q96P69 363 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 POMKQ9H5K3 350 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 FBRSL1Q9HCM7 1045 aaKnown RBP14.44□□□□□ -0.1
MSH5-206ENST00000423982 PADI3Q9ULW8 664 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 AURKAO14965 403 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 TRIM24O15164 1050 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SPTLC1O15269 473 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 YWHAQP27348 245 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SOX11P35716 441 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 CSRP3P50461 194 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 AFF1P51825 1210 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 CDC42EP1Q00587 391 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 POU6F1Q14863 301 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 NHSL2Q5HYW2 709 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 KDELC2Q7Z4H8 507 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 PELI3Q8N2H9 469 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SPPL2BQ8TCT7 592 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 ISOC1Q96CN7 298 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SLC45A3Q96JT2 553 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 TSNARE1Q96NA8 513 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 PNPLA3Q9NST1 481 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 CNOT11Q9UKZ1 510 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 AKAP10O43572 662 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 VARSP26640 1264 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 GRIA3P42263 894 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 BCAT1P54687 386 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 PRKCQQ04759 706 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 FASTKQ14296 549 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 BBS5Q8N3I7 341 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 C12orf43Q96C57 262 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 CELF6Q96J87 481 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 TSEN34Q9BSV6 310 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 MUC3BQ9H195 1237 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 GOLGA2P5Q9HBQ8 144 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SUCOQ9UBS9 1254 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 VTI1BQ9UEU0 232 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 TANC1Q9C0D5 1861 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 HEATR9A2RTY3 570 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 MGEA5O60502 916 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 ATE1O95260 518 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 ATP6V1B2P21281 511 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 CCR3P51677 355 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 MAPK10P53779 464 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SLC5A3P53794 718 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 CSE1LP55060 971 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 NAA20P61599 178 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 PAFAH1B3Q15102 231 aaKnown RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 ADRM1Q16186 407 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 LZTR1Q8N653 840 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 RHOJQ9H4E5 214 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SMOXQ9NWM0 555 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 SLC2A6Q9UGQ3 507 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 DOLKQ9UPQ8 538 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 ACOT9Q9Y305 439 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 MTF2Q9Y483 593 aaPredicted RBP14.43□□□□□ -0.1
MSH5-206ENST00000423982 IPPQ9Y573 584 aa14.43□□□□□ -0.1
MSH5-206ENST00000423982 DLGAP1O14490 977 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 SLC22A2O15244 555 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 MT-CYBP00156 380 aaPredicted RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 JCHAINP01591 159 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 FAM163BP0C2L3 166 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 CD247P20963 164 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 FUT4P22083 530 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 SLC7A2P52569 658 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 MGAT3Q09327 533 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 SLC12A1Q13621 1099 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 MBTPS1Q14703 1052 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 UBXN11Q5T124 520 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 FBXO46Q6PJ61 603 aaPredicted RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 CHST15Q7LFX5 561 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms