RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 LCA5LO95447 670 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 C6P13671 934 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 GM2AP17900 193 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 XPAP23025 273 aaPredicted RBP17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 GARSP41250 739 aaKnown RBP17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 ARHGAP25P42331 645 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 RABIFP47224 123 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 LIG3P49916 1009 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 GBE1Q04446 702 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 TRAF2Q12933 501 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 DNAJC3Q13217 504 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 IHHQ14623 411 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 IRF4Q15306 451 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 WSCD2Q2TBF2 565 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 SPOCK2Q92563 424 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 MAML1Q92585 1016 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 IFT43Q96FT9 208 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 MRFAP1L1Q96HT8 127 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 CNDP2Q96KP4 475 aaKnown RBP17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 RNF157Q96PX1 679 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 NOD2Q9HC29 1040 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 TFR2Q9UP52 801 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 HYOU1Q9Y4L1 999 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 PCDHGC4Q9Y5F7 938 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 TRIM38O00635 465 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 ENC1O14682 589 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 LDOC1O95751 146 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 HSPA9P38646 679 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 MMP13P45452 471 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 EIF2B5Q13144 721 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 PDE1CQ14123 709 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 AGERQ15109 404 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 PROX2Q3B8N5 592 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 MARC1Q5VT66 337 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 UNQ6494/PRO21346Q6UXR6 183 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 DPPA4Q7L190 304 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 LRRC49Q8IUZ0 686 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 PLD5Q8N7P1 536 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 DNAJC28Q9NX36 388 aa17.95■□□□□ 0.46
SBDSP1-202ENST00000423945 SIGLEC6O43699 453 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 CSF2P04141 144 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 FECHP22830 423 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 ACADVLP49748 655 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 ST3GAL2Q16842 350 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 ERAP2Q6P179 960 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 LIPIQ6XZB0 460 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 NYAP1Q6ZVC0 841 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 MARCH9Q86YJ5 346 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 MAP7D3Q8IWC1 876 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 NT5MQ9NPB1 228 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 SCUBE2Q9NQ36 999 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 DTLQ9NZJ0 730 aa17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 GOLGA4Q13439 2230 aaKnown RBP17.94■□□□□ 0.46
SBDSP1-202ENST00000423945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 LRRD1A4D1F6 860 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 ZNF487B1APH4 448 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 MATN3O15232 486 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 SOCS5O75159 536 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 KRT37O76014 449 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 COMTP21964 271 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 MAGEA1P43355 309 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 HADHBP55084 474 aaKnown RBP17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 PTPRRQ15256 657 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 IFI16Q16666 785 aaKnown RBP17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 FAM182AQ5T1J6 154 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 SLC9A4Q6AI14 798 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 TMPRSS7Q7RTY8 843 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 PARGQ86W56 976 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 PLA2G15Q8NCC3 412 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 OR4C6Q8NH72 309 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 FATE1Q969F0 183 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 TCEAL2Q9H3H9 227 aaPredicted RBP17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 GOLPH3Q9H4A6 298 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 B4GALT6Q9UBX8 382 aa17.93■□□□□ 0.46
SBDSP1-202ENST00000423945 FREM2Q5SZK8 3169 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 CFAP69A5D8W1 941 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 A8MX80 341 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 FFAR2O15552 330 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 NEBLO76041 1014 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 PROS1P07225 676 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 CCNCP24863 283 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 CLDN6P56747 220 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 YPEL5P62699 121 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 LRRC14Q15048 493 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 CCDC157Q569K6 752 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 RALGPS1Q5JS13 557 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 LRRC38Q5VT99 294 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 DHRS13Q6UX07 377 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 CCNI2Q6ZMN8 369 aaPredicted RBP17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 VSIG1Q86XK7 387 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 RBFAQ8N0V3 343 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 PELI3Q8N2H9 469 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 BBS5Q8N3I7 341 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 ZNF548Q8NEK5 533 aaPredicted RBP17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 NSMCE1Q8WV22 266 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms